CoexViewer

Coexpression detail for AT5G38930 and AT3G05727
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT5G38930 RmlC-like cupins superfamily protein 833885 At5g38930 0.04 10.45 11.37 12.89
ath AT3G05727 S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family 3768785 At3g05727 0.04
Platform:

coex z = 11.3671



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 833885
(z-scored expression)		 3768785
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
55.8 -5.6 -9.9 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
32.9 5.6 5.9 SRP074485 SRR3480194 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
30.3 5.2 5.8 SRP074485 SRR3480195 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
27.4 4.7 5.8 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
22.1 -4.8 -4.6 SRP136326 SRR6941654 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
19.9 4.9 4.0 ERP012234 ERR1025341 Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
18.7 -5.6 -3.3 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
18.0 3.2 5.7 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
17.5 -5.8 -3.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
16.5 3.8 4.3 SRP378006 SRR19505556 Transcriptional Reprogramming during Floral Fate Acquisition II
15.8 4.2 3.8 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
15.4 -3.5 -4.4 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.4 -3.5 -4.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.3 3.1 5.0 ERP115370 ERR3333411 Arabidopsis tissue atlas
15.1 -3.7 -4.1 SRP051764 SRR1744406 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
15.1 -3.4 -4.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
15.0 2.8 5.3 SRP055192 SRR1811535 Arabidopsis thaliana Raw sequence reads
15.0 -3.0 -5.1 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.6 3.8 3.8 SRP303743 SRR13575634 Arabidopsis thaliana Transcriptome for different potassium
13.9 -3.7 -3.7 SRP051764 SRR1744405 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
13.9 -5.4 -2.6 SRP285090 SRR12697061 Differential alteration of plant functions by homologous fungal candidate effectors
13.4 -5.6 -2.4 SRP277946 SRR12470197 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.3 -6.0 -2.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
12.9 4.2 3.1 ERP116123 ERR3414833 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.9 -3.5 -3.7 SRP150217 SRR7289627 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.9 -2.8 -4.6 SRP372716 SRR18963426 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
12.8 -4.4 -2.9 SRP187062 SRR8645798 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
12.8 -4.4 -2.9 SRP187062 SRR8645800 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
12.7 -3.0 -4.2 SRP114806 SRR5894428 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.7 -5.6 -2.3 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -2.3 -5.3 SRP136269 SRR6880755 Cold priming and triggering of Arabidopsis accessions
12.4 -3.4 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.2 1.7 7.3 SRP100938 SRR5304669 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.9 -3.0 -4.0 SRP114806 SRR5894470 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.7 4.4 2.6 SRP306740 SRR13724690 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
11.6 3.9 3.0 ERP116123 ERR3414834 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.6 -3.1 -3.7 SRP276408 SRR12401354 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
11.4 -3.0 -3.9 SRP277946 SRR12469605 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -3.8 -3.0 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.3 -2.1 -5.3 SRP090458 SRR4295829 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.3 3.0 3.8 SRP017386 SRR627680 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.3 -4.4 -2.6 SRP187062 SRR8645805 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
11.3 3.8 3.0 SRP173235 SRR8310108 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
11.2 4.1 2.8 ERP116123 ERR3414911 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.0 3.1 3.6 SRP249648 SRR11093803 Gene dosge responses in nascent Arabidopsis thaliana polyploids
10.7 3.6 3.0 SRP185814 SRR8570506 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
10.7 3.7 2.9 ERP116123 ERR3414912 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.6 3.8 2.8 SRP115534 SRR5937129 RNA-seq of genes mis-regulated in WT and the bpc1,2,3,4,6 loss-of-function mutant in response to cytokinin in roots of Arabidopsis thaliana
10.6 5.7 1.9 SRP172180 SRR8275247 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
10.6 4.4 2.4 SRP244736 SRR10949339 Transcriptional regulation of cell division and cytokinin response in Arabidopsis shoot apical meristem [RNA-seq]
10.5 3.5 3.0 ERP116123 ERR3414870 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 3.5 3.0 ERP116123 ERR3414816 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.0 3.3 3.1 SRP149815 SRR7266141 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
Note: Samples whose contribution is more than 10 are outputted.



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