CoexViewer

Coexpression detail for AT5G38940 and AT3G05727
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT5G38940 RmlC-like cupins superfamily protein 833886 At5g38940 0.14 6.35 6.91 20.70
ath AT3G05727 S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family 3768785 At3g05727 0.14
Platform:

coex z = 6.9108



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 833886
(z-scored expression)		 3768785
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
97.7 -9.8 -9.9 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
55.0 4.4 12.4 SRP091641 SRR4426967 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
27.3 4.8 5.7 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
23.7 4.1 5.8 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
23.7 -6.8 -3.5 SRP095347 SRR5120254 Genetic influences on gene expression in Arabidopsis thaliana
23.3 -5.1 -4.6 SRP136326 SRR6941654 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
22.4 -4.4 -5.1 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
20.2 3.5 5.7 SRP091641 SRR4426975 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
19.0 3.2 5.9 SRP074485 SRR3480194 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
18.6 3.2 5.8 SRP074485 SRR3480195 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
15.5 -3.4 -4.6 SRP372716 SRR18963426 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
14.8 -4.0 -3.7 SRP051764 SRR1744405 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
14.5 -3.3 -4.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.5 -3.2 -4.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
13.3 -3.0 -4.4 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.3 -3.1 -4.2 SRP114806 SRR5894428 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.1 3.5 3.8 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
13.0 4.8 2.7 SRP126290 SRR6356033 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
12.7 -3.3 -3.9 SRP277946 SRR12469605 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 3.1 4.0 ERP012234 ERR1025341 Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
12.5 -3.5 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.4 -3.1 -4.1 SRP051764 SRR1744406 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
12.3 -4.5 -2.7 SRP136269 SRR6880756 Cold priming and triggering of Arabidopsis accessions
12.1 2.4 5.0 ERP115370 ERR3333411 Arabidopsis tissue atlas
12.1 -4.1 -3.0 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 -3.4 -3.4 SRP100080 SRR5264233 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
11.8 -3.5 -3.3 SRP144429 SRR7100828 Hybrid vigour can be enhanced by delayed leaf senescence
11.7 -2.9 -4.0 SRP114806 SRR5894470 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.6 -3.2 -3.7 SRP150217 SRR7289627 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.3 0.9 12.8 SRP100064 SRR5263166 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.3 2.1 5.3 SRP108634 SRR5646718 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
11.3 2.1 5.3 SRP055192 SRR1811535 Arabidopsis thaliana Raw sequence reads
10.9 -3.3 -3.3 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 2.5 4.3 SRP378006 SRR19505556 Transcriptional Reprogramming during Floral Fate Acquisition II
10.9 -2.0 -5.3 SRP136269 SRR6880755 Cold priming and triggering of Arabidopsis accessions
10.8 -2.9 -3.7 SRP276408 SRR12401354 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
10.6 -4.3 -2.5 SRP361288 SRR18124828 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.4 2.9 3.6 SRP249648 SRR11093803 Gene dosge responses in nascent Arabidopsis thaliana polyploids
10.4 -3.2 -3.2 SRP266469 SRR11954332 RNA sequencing reveals the genetic relationship between TOPPs and its regulatory subunit PP1R3 in Arabidopsis thaliana
10.3 2.3 4.6 SRP188270 SRR8717649 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
10.0 2.9 3.5 SRP267870 SRR12046122 Single-cell RNA-seq data of Arabidopsis root
Note: Samples whose contribution is more than 10 are outputted.



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