CoexViewer

Coexpression detail for AT5G38940 and AT5G38930
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT5G38940 RmlC-like cupins superfamily protein 833886 At5g38940 0.14 17.28 18.90 20.20
ath AT5G38930 RmlC-like cupins superfamily protein 833885 At5g38930 0.14
Platform:

coex z = 18.8995



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 833886
(z-scored expression)		 833885
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
55.2 -9.8 -5.6 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
24.3 -5.1 -4.8 SRP136326 SRR6941654 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
22.0 3.5 6.2 SRP266133 SRR11934495 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
20.6 -3.4 -6.0 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
19.5 4.1 4.7 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
18.9 -3.5 -5.4 SRP285090 SRR12697061 Differential alteration of plant functions by homologous fungal candidate effectors
18.4 -3.3 -5.6 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.9 3.2 5.6 SRP074485 SRR3480194 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
17.9 3.0 6.1 SRP269194 SRR12108086 Mapping the transcriptional response to auxin in differentiated endodermal cells
16.9 3.2 5.2 SRP074485 SRR3480195 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
16.5 -4.8 -3.4 SRP218723 SRR9995102 Plant 22-nt siRNAs mediate translational repression and stress adaptation
16.4 2.6 6.2 SRP266133 SRR11934650 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
15.7 3.3 4.8 SRP266133 SRR11934612 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
15.7 -3.9 -4.0 SRP122518 SRR6230493 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
15.6 -4.1 -3.8 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.5 3.1 4.9 ERP012234 ERR1025341 Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
15.2 -2.9 -5.2 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.1 4.8 3.2 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
14.7 -4.0 -3.7 SRP051764 SRR1744405 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
14.7 3.1 4.8 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.5 3.5 4.2 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
14.2 2.5 5.8 SRP253504 SRR11359541 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.2 -2.3 -5.6 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 -4.4 -3.0 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 2.7 4.8 SRP266133 SRR11934472 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.6 -2.2 -5.8 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.6 2.6 4.8 SRP266133 SRR11934617 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.4 -2.2 -5.6 SRP277946 SRR12470153 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.5 -3.4 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.9 -4.0 -3.0 SRP052276 SRR1760174 Arabidopsis thaliana Transcriptome or Gene expression
11.8 -6.8 -1.7 SRP095347 SRR5120254 Genetic influences on gene expression in Arabidopsis thaliana
11.7 -3.3 -3.5 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 -3.1 -3.7 SRP051764 SRR1744406 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
11.3 2.8 4.1 ERP116123 ERR3414911 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.2 -3.2 -3.5 SRP150217 SRR7289627 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.0 3.7 ERP116123 ERR3414912 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.9 -3.1 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 -3.5 -3.1 SRP098906 SRR5231015 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
10.8 -3.2 -3.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 3.9 2.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.7 -3.0 -3.5 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 2.4 4.4 SRP286390 SRR12773657 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
10.6 2.9 3.7 ERP116123 ERR3414830 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.6 -4.5 -2.3 SRP136269 SRR6880756 Cold priming and triggering of Arabidopsis accessions
10.4 2.2 4.7 SRP065807 SRR2927339 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
10.4 2.5 4.2 ERP116123 ERR3414833 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.3 2.6 4.0 SRP093766 SRR5045315 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
10.3 -1.8 -5.6 SRP277946 SRR12470197 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 2.2 4.6 ERP023227 ERR1990473 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
Note: Samples whose contribution is more than 10 are outputted.



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