CoexViewer

Coexpression detail for ERA1 and AT4G31180
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ERA1 Prenyltransferase family protein 834026 At5g40280 0.4 6.08 5.78 4.73 530.30 2.91 1.55 0.37 2.82 1.23 3.68
ath AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily protein 829246 At4g31180 0.4
Platform:

coex z = 5.7801



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 834026
(z-scored expression)		 829246
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
44.7 -6.7 -6.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
31.2 -5.8 -5.4 ERP115370 ERR3333443 Arabidopsis tissue atlas
29.2 -5.2 -5.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.2 -5.9 -4.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
21.0 -4.2 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.1 4.0 5.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.0 -4.3 -4.0 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.9 3.8 4.5 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
16.6 -4.1 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.9 -4.2 -3.8 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
15.5 -4.0 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.8 -4.1 -3.6 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
14.5 -4.1 -3.6 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
14.2 -3.6 -3.9 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
14.1 3.7 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
14.0 -3.9 -3.6 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.7 -4.4 -3.1 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.7 -2.9 -4.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.1 -3.5 -3.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
13.0 3.9 3.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.8 -3.6 -3.6 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.8 -3.1 -4.1 SRP126574 SRR6369407 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.8 -3.2 -4.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.8 -3.6 -3.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.7 3.5 3.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.6 3.4 3.7 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -4.3 -2.9 SRP285119 SRR12698770 Time of day prioritizes the pool of translating mRNAs in response to heat stress
12.3 3.5 3.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 3.4 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.2 3.5 3.5 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 3.1 3.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -3.3 -3.6 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.5 -3.5 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -3.4 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.4 -3.2 -3.6 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
11.3 3.2 3.6 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.2 3.3 3.4 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.0 -3.0 -3.7 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.0 -3.8 -2.9 SRP315390 SRR14275191 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.9 -2.6 -4.3 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.9 3.3 3.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.8 -3.2 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 3.0 3.5 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.7 -3.1 -3.5 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -4.8 -2.1 SRP229078 SRR10416615 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
10.3 -3.0 -3.4 SRP194106 SRR8983768 Arabidopsis thaliana 35S:ANT-GR Transcriptome
10.2 -2.9 -3.6 SRP073379 SRR3393591 Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
10.2 -3.4 -3.0 ERP013651 ERR1194830 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.2 2.8 3.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.1 -3.1 -3.2 ERP021226 ERR1811898 Arabidopsis RNA-Seq Differential Gene Expression profiling
10.1 3.4 3.0 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 3.0 3.3 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.0 -3.6 -2.8 SRP285119 SRR12698776 Time of day prioritizes the pool of translating mRNAs in response to heat stress
Note: Samples whose contribution is more than 10 are outputted.



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