CoexViewer

Coexpression detail for ERA1 and AT5G63080
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ERA1 Prenyltransferase family protein 834026 At5g40280 0.4 6.89 5.35 6.57 176.70 2.49 1.18 0.22 4.40 0.20 1.46
ath AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 836428 At5g63080 0.4
Platform:

coex z = 5.3478



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 834026
(z-scored expression)		 836428
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.7 -6.7 -5.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
33.5 -5.8 -5.8 ERP115370 ERR3333443 Arabidopsis tissue atlas
27.4 -5.9 -4.6 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
25.1 -5.2 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.2 -4.2 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.7 -4.0 -4.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.3 -4.1 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.3 -4.2 -3.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
16.3 -3.9 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.8 4.0 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.8 -4.1 -3.8 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
15.5 -3.6 -4.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
15.3 -4.4 -3.5 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.0 -4.3 -3.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.8 -3.2 -4.7 ERP118109 ERR3624355 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
14.6 3.8 3.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.5 -4.7 -2.9 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.4 3.7 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.0 -3.4 -3.5 ERP013651 ERR1194830 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
11.8 -3.6 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.7 3.5 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.7 -4.0 -2.9 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 -3.1 -3.7 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.4 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.1 3.4 3.2 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.5 3.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 -2.9 -3.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.8 -3.3 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.8 3.5 3.1 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 3.0 3.5 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.3 -3.2 SRP214325 SRR9672820 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
10.4 -3.0 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.3 -3.2 -3.3 ERP118109 ERR3624358 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.2 3.3 3.1 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.2 -3.4 -3.0 SRP091641 SRR4426634 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.2 3.3 3.1 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 3.1 3.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 3.4 3.0 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.1 -3.1 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.2 -3.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.1 -2.6 -3.8 SRP191093 SRR8859571 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
Note: Samples whose contribution is more than 10 are outputted.



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