CoexViewer

Coexpression detail for AT5G41400 and PIN3
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G41400 RING/U-box superfamily protein 834142 At5g41400 0.47 5.45 4.52 4.91 524.50 4.66 4.28 -0.54 1.36 -1.77 4.23
ath PIN3 Auxin efflux carrier family protein 843432 At1g70940 0.47
Platform:

coex z = 4.5164



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 834142
(z-scored expression)		 843432
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.5 -5.2 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.3 -4.5 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.4 5.0 4.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.2 -3.5 -4.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.1 -5.2 -3.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.1 4.5 3.6 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.9 -5.7 -2.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.6 -4.1 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.1 -3.5 -4.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.2 -4.5 -3.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.5 -3.1 -4.4 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.9 -4.5 -2.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 -4.7 -2.7 SRP325022 SRR14877134 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
12.1 4.0 3.0 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.5 -3.2 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 3.1 3.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -3.9 -2.9 SRP266133 SRR11934633 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.0 2.8 3.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 3.5 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.6 -3.4 -3.2 SRP065994 SRR2932456 Identification of plant vacuolar transporters mediating phosphate storage
10.5 -3.3 -3.2 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
10.5 2.6 4.0 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -2.9 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.6 -2.9 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -2.6 -3.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.0 -3.5 -2.9 SRP157719 SRR7688912 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
Note: Samples whose contribution is more than 10 are outputted.



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