CoexViewer

Coexpression detail for AT5G45360 and AT3G60040
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT5G45360 F-box family protein 834572 At5g45360 0.75 5.45 5.53 1.10
ath AT3G60040 F-box family protein 825174 At3g60040 0.75
Platform:

coex z = 5.5307



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 834572
(z-scored expression)		 825174
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
42.4 -6.5 -6.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.4 5.5 4.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
21.5 -5.2 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.3 -5.1 -4.0 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.3 -4.4 -4.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
19.0 -4.2 -4.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
18.9 -5.4 -3.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
16.2 -3.0 -5.3 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
16.2 -4.2 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.9 -4.0 -3.7 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.4 -4.4 -3.3 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.9 -4.7 -3.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.7 -3.4 -4.0 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
13.6 4.0 3.5 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 -2.3 -5.9 SRP104760 SRR5467212 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
13.2 -3.6 -3.7 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.9 -3.7 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 -4.5 -2.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
12.8 -3.8 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.7 -3.4 -3.8 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.6 3.7 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.3 3.7 3.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.2 3.7 3.3 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
12.2 -3.3 -3.7 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.7 3.8 3.1 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -3.3 -3.5 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.4 -3.5 -3.3 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
11.4 -3.0 -3.7 SRP017386 SRR627685 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.3 -2.8 -4.1 SRP073485 SRR3401814 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.2 3.5 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.2 -3.2 -3.5 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.1 3.6 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.7 3.6 3.0 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.7 -2.4 -4.4 SRP091641 SRR4426423 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 -3.4 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 3.5 3.0 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.6 -4.1 -2.6 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.5 4.1 2.6 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.4 3.3 3.2 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.4 3.8 2.8 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.4 -2.1 -5.0 SRP154321 SRR7536112 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.3 -3.7 -2.8 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
Note: Samples whose contribution is more than 10 are outputted.



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