CoexViewer
Coexpression detail for AT5G45790 and ABO5
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT5G45790 | Ubiquitin carboxyl-terminal hydrolase family protein | 834619 | At5g45790 | 0.23 | 5.70 | 5.76 | 1.42 | |
| ath | ABO5 | ABA Overly-Sensitive 5 | 841625 | At1g51965 | 0.23 |
|
coex z = 5.7635 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 834619 (z-scored expression) |
841625 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 27.5 | -5.6 | -4.9 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.0 | -5.1 | -4.9 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 22.3 | -4.9 | -4.6 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 20.2 | -4.4 | -4.5 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 18.3 | -3.9 | -4.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.1 | -4.4 | -3.9 | ERP116123 | ERR3414637 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 16.0 | -6.0 | -2.7 | SRP091641 | SRR4426346 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 15.5 | -2.5 | -6.3 | SRP091641 | SRR4426959 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.9 | -6.0 | -2.5 | SRP091641 | SRR4426344 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.6 | -7.9 | -1.9 | SRP277946 | SRR12469718 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.0 | -2.5 | -5.5 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 13.7 | -4.1 | -3.4 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 13.5 | -4.8 | -2.8 | SRP325022 | SRR14877135 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 13.4 | -3.2 | -4.1 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 13.3 | -3.9 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 13.3 | -3.4 | -3.9 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 13.1 | -3.7 | -3.6 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 13.1 | -4.6 | -2.9 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 13.0 | -4.9 | -2.6 | ERP118109 | ERR3624436 | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
| 12.7 | -3.7 | -3.4 | SRP050945 | SRR1696859 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 12.4 | 3.8 | 3.3 | SRP166137 | SRR8078926 | RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana) |
| 12.1 | -3.4 | -3.6 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 12.0 | -3.6 | -3.3 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.8 | -3.9 | -3.0 | SRP103736 | SRR5440891 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 11.1 | -6.0 | -1.9 | SRP091641 | SRR4426356 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.1 | -3.0 | -3.8 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.8 | -3.2 | -3.4 | SRP163443 | SRR8060876 | RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration |
| 10.7 | 3.1 | 3.4 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.5 | -2.6 | -4.0 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 10.3 | 3.0 | 3.4 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 10.1 | 2.9 | 3.5 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.1 | -3.1 | -3.3 | SRP073724 | SRR3419765 | Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system |
| 10.0 | -3.4 | -2.9 | SRP017386 | SRR627679 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 10.0 | 4.2 | 2.4 | SRP021196 | SRR1610505 | RNA-Seq of single cells from the Arabidopsis root |
The preparation time of this page was 0.8 [sec].
