CoexViewer

Coexpression detail for AT5G48360 and AT3G51290
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G48360 Actin-binding FH2 (formin homology 2) family protein 834889 At5g48360 0.58 9.98 7.84 9.41 98.60 5.19 2.88 2.40 1.53 0.57 4.87
ath AT3G51290 pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) 824292 At3g51290 0.58
Platform:

coex z = 7.8419



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 834889
(z-scored expression)		 824292
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
40.5 -6.4 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.1 -3.8 -7.4 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
25.6 -4.9 -5.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
20.2 4.8 4.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
19.9 -3.0 -6.6 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
18.6 4.8 3.9 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.0 4.2 4.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.1 -4.3 -3.8 SRP339340 SRR16119309 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
15.5 -4.1 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.7 -4.5 -3.3 SRP103817 SRR5444399 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
14.2 -3.2 -4.4 SRP315390 SRR14275190 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
14.0 -3.6 -3.9 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
13.9 -4.1 -3.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.8 -2.7 -5.1 SRP277946 SRR12470035 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 3.2 4.0 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.6 -3.5 -3.5 SRP114806 SRR5894494 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.5 -3.1 -4.1 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.4 -3.4 -3.7 SRP220476 SRR10072745 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
12.2 -3.0 -4.1 SRP125388 SRR6312375 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
12.2 -3.1 -4.0 SRP136326 SRR6941654 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
11.9 -3.4 -3.5 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.7 -3.3 -3.6 SRP199288 SRR9113128 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.7 -3.7 -3.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.4 -2.5 -4.6 SRP163044 SRR7947090 Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA
11.2 -2.4 -4.7 SRP154321 SRR7536082 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
11.2 -2.7 -4.2 SRP100064 SRR5263008 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.9 -5.0 -2.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
10.8 -2.8 -3.8 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.7 -2.9 -3.7 SRP220476 SRR10072752 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.6 -3.1 -3.5 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 -3.2 -3.3 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.4 -2.8 -3.7 SRP095010 SRR5100685 Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
10.3 -3.4 -3.0 SRP083970 SRR4115401 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.3 -3.5 -3.0 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -3.1 -3.3 SRP276408 SRR12401352 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
10.2 -3.3 -3.1 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
10.0 -3.1 -3.2 SRP155742 SRR8699970 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.0 -3.1 -3.2 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.0 -3.1 -3.2 SRP155742 SRR8699967 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.0 -3.1 -3.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
Note: Samples whose contribution is more than 10 are outputted.



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