CoexViewer

Coexpression detail for AT5G49900 and AT1G21780
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G49900 Beta-glucosidase, GBA2 type family protein 835053 At5g49900 0.51 -0.08 0.08 -0.22 4149.60 0.52 1.22 4.00 -2.13 1.50 -0.09
ath AT1G21780 BTB/POZ domain-containing protein 838782 At1g21780 0.51
Platform:

coex z = 0.0767



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 835053
(z-scored expression)		 838782
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
29.5 -4.0 -7.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.3 -5.2 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.0 4.9 4.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.3 -4.5 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.0 -3.3 -5.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.6 -3.8 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.6 -5.3 -2.9 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
14.7 -3.6 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.5 3.2 4.5 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
14.0 -4.2 -3.3 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
13.1 3.3 4.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.0 -3.2 -4.0 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.7 -4.2 -3.0 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
12.7 -2.7 -4.8 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
12.3 3.3 3.7 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.2 3.4 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.1 -4.1 -3.0 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.1 2.9 4.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 -3.4 -3.5 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.9 -2.8 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.8 3.3 3.5 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 3.5 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 3.5 3.3 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -3.6 -3.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.2 -3.6 -3.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.1 -2.9 -3.9 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.1 -3.8 -2.9 SRP074485 SRR3480157 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
11.1 2.9 3.8 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 -3.6 -3.0 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.8 -3.1 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.2 -3.3 SRP017386 SRR627685 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.2 3.0 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -2.7 -3.8 SRP051513 SRR1734309 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
10.0 -3.2 -3.2 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
Note: Samples whose contribution is more than 10 are outputted.



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