CoexViewer

Coexpression detail for APC2 and PFA-DSP4
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath APC2 Mitochondrial substrate carrier family protein 835178 At5g51050 0.49 8.89 8.12 7.26 10.60 1.33 1.19 5.23 2.62 1.21 2.45
ath PFA-DSP4 Phosphotyrosine protein phosphatases superfamily protein 825706 At4g03960 0.49
Platform:

coex z = 8.1246



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 835178
(z-scored expression)		 825706
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.4 -5.4 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.3 -5.2 -4.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.1 -4.4 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.9 -4.5 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.8 4.4 4.5 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
18.1 4.2 4.3 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
15.7 4.3 3.7 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
15.5 -3.6 -4.4 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.4 -3.7 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.1 -2.7 -5.1 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.9 -3.4 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.1 3.0 4.3 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 -4.1 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.8 -4.1 -3.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.8 -3.4 -3.7 SRP285902 SRR12747513 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
12.6 -3.6 -3.5 SRP158306 SRR7695197 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.2 -3.2 -3.8 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.1 -3.5 -3.5 SRP136812 SRR6919678 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
12.1 -3.6 -3.3 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.6 -3.5 -3.3 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 -2.6 -4.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 -3.3 -3.4 SRP257480 SRR11573268 Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis
11.4 -4.5 -2.5 SRP126574 SRR6369550 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.4 -2.1 -5.3 SRP266133 SRR11934474 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.2 -3.9 -2.9 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.4 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 3.1 3.6 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
11.0 3.2 3.4 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 -5.1 -2.1 SRP101274 SRR5308823 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.6 -2.6 -4.1 SRP126574 SRR6369375 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 -2.7 -3.9 SRP188810 SRR8749816 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
10.3 3.4 3.0 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.3 -3.6 -2.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -1.9 -5.4 SRP154322 SRR7536176 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
10.1 -4.6 -2.2 SRP105272 SRR5482538 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
10.1 2.4 4.2 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.2 -3.2 SRP214585 SRR9681539 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
Note: Samples whose contribution is more than 10 are outputted.



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