CoexViewer

Coexpression detail for HSP90.1 and AtCDC48B
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath HSP90.1 heat shock-like protein 835341 At5g52640 0.71 9.58 9.45 7.10 4.50 2.25 5.00 2.76 4.09 3.32 5.45
ath AtCDC48B ATPase, AAA-type, CDC48 protein 824489 At3g53230 0.71
Platform:

coex z = 9.4549



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 835341
(z-scored expression)		 824489
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
24.0 -4.7 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.4 5.1 4.0 SRP097877 SRR5205658 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
19.0 4.4 4.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.9 4.1 4.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
17.4 -4.2 -4.1 SRP229078 SRR10416643 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
16.6 4.0 4.2 SRP063017 SRR2221840 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
13.9 -3.8 -3.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.0 -3.3 -3.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 3.2 3.6 SRP173766 SRR8335143 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
11.5 3.4 3.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -2.0 -5.5 SRP214325 SRR9672816 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
11.3 3.8 3.0 SRP148699 SRR7204078 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
11.1 3.9 2.8 SRP234036 SRR10560308 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
10.4 -3.8 -2.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
10.3 3.3 3.1 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.1 3.0 3.4 SRP212098 SRR9602195 Gene expression profiling study by RNA-seq for identifying genes associated with sound vibration in plant
10.1 3.4 2.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.0 -3.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
Note: Samples whose contribution is more than 10 are outputted.



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