CoexViewer

Coexpression detail for CNGC1 and NAK
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath CNGC1 cyclic nucleotide gated channel 1 835393 At5g53130 0.82 6.97 6.74 5.31 69.30 3.00 3.07 1.53 1.34 1.68 6.80
ath NAK Protein kinase superfamily protein 831880 At5g02290 0.82
Platform:

coex z = 6.7445



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 835393
(z-scored expression)		 831880
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
36.1 -6.5 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.9 -5.7 -5.3 ERP115370 ERR3333443 Arabidopsis tissue atlas
27.6 -5.3 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.9 4.3 5.8 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
22.4 -5.1 -4.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.9 -4.6 -3.8 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.8 4.1 4.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.6 4.4 4.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.4 -3.9 -4.5 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.2 4.1 4.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.9 -4.0 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.9 4.0 4.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.5 4.2 3.9 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.0 -4.5 -3.5 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
16.0 4.5 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.5 4.0 3.9 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.4 3.9 3.9 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.0 -4.0 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.1 -3.7 -3.8 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.7 -3.6 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.4 -3.4 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.9 -3.3 -3.9 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.5 -3.6 -3.5 SRP249854 SRR11103165 A dynamic pattern of local auxin sources is required for root regeneration
12.1 3.6 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.1 -3.7 -3.2 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 -3.0 -3.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 -3.4 -3.5 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.7 -3.8 -3.1 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -3.3 -3.5 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 3.6 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.2 4.0 2.8 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 3.0 3.7 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 -3.7 -3.0 SRP090913 SRR8185440 WallOmics
10.6 -3.1 -3.4 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.4 -3.1 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.4 -3.2 -3.3 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 -3.1 -3.4 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.3 -3.0 -3.4 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 -3.6 -2.8 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.3 3.5 2.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.4 -3.0 SRP039091 SRR1179987 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.2 3.2 3.2 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.2 -3.0 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.2 3.3 3.1 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.0 -3.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -2.8 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.1 -3.2 -3.2 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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