CoexViewer
Coexpression detail for FTSZ1-1 and CPZ
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ath | FTSZ1-1 | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 | 835621 | At5g55280 | 0.84 | 8.91 | 8.54 | 6.85 | 32.90 | 3.92 | 2.91 | 3.81 | 2.35 | 3.46 | 5.38 | |
ath | CPZ | Metallo-hydrolase/oxidoreductase superfamily protein | 814995 | At2g04530 | 0.84 |
coex z = 8.5403 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Sample contribution score* | 835621 (z-scored expression) |
814995 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
---|---|---|---|---|---|
37.6 | -6.0 | -6.2 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
18.2 | -4.4 | -4.2 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
17.6 | -4.5 | -3.9 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
16.7 | -4.2 | -4.0 | SRP165731 | SRR8054398 | The embryonic transcriptome of Arabidopsis thaliana |
16.1 | -2.9 | -5.5 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
16.0 | -4.6 | -3.5 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
16.0 | -4.6 | -3.5 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
15.4 | -4.0 | -3.9 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
15.2 | 4.2 | 3.6 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
14.9 | -3.2 | -4.7 | SRP229078 | SRR10416643 | Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency |
14.7 | -3.7 | -3.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
14.0 | -4.0 | -3.5 | SRP101274 | SRR5308642 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
14.0 | -4.6 | -3.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
13.1 | -3.8 | -3.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
12.5 | -3.5 | -3.6 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
12.1 | -2.6 | -4.7 | SRP155742 | SRR8699976 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
11.6 | -2.9 | -3.9 | SRP119072 | SRR6113964 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
11.6 | 3.7 | 3.1 | SRP253504 | SRR11359543 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
11.5 | 3.4 | 3.4 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
11.4 | -3.5 | -3.3 | SRP162520 | SRR7899136 | Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings. |
11.3 | -2.8 | -4.0 | SRP157719 | SRR7688912 | Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC] |
11.3 | 3.3 | 3.5 | SRP365283 | SRR18430906 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
11.2 | -3.8 | -3.0 | SRP114806 | SRR5894632 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
11.1 | -2.3 | -4.7 | SRP267137 | SRR12005730 | ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks |
11.0 | 4.2 | 2.6 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
11.0 | -3.1 | -3.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
11.0 | -3.3 | -3.4 | SRP150217 | SRR7289598 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
10.8 | -3.0 | -3.7 | SRP285090 | SRR12697085 | Differential alteration of plant functions by homologous fungal candidate effectors |
10.5 | -3.2 | -3.3 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
10.4 | -2.3 | -4.6 | SRP277943 | SRR12469374 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST] |
10.3 | -2.7 | -3.8 | SRP234036 | SRR10560319 | Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM) |
10.2 | 3.3 | 3.1 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
10.2 | -3.4 | -3.0 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
10.2 | -3.2 | -3.1 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
10.2 | 4.2 | 2.4 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
10.2 | 3.5 | 2.9 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
10.2 | 3.8 | 2.7 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
The preparation time of this page was 1.6 [sec].