CoexViewer

Coexpression detail for AT5G56980 and AT3G11420
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G56980 cotton fiber protein 835800 At5g56980 0.72 3.82 3.83 2.77 80.60 1.14 2.59 1.96 3.67 0.82 3.02
ath AT3G11420 beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) 820315 At3g11420 0.72
Platform:

coex z = 3.8346



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 835800
(z-scored expression)		 820315
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.6 5.8 5.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
28.4 -5.3 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
28.2 -5.5 -5.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
19.1 5.0 3.8 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.2 -4.1 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.9 2.9 4.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.9 -3.3 -3.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.8 -3.0 -4.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.5 3.9 3.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.3 -3.7 -3.3 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
12.2 -4.0 -3.0 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 3.2 3.8 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 3.5 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.3 3.0 3.7 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -3.6 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 -2.6 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
10.9 3.2 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.8 -3.4 -3.1 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.7 3.6 2.9 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.6 2.9 3.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.3 -3.2 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.5 3.4 3.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.5 -3.0 -3.5 SRP003799 SRR068964 Extensive imprinted gene expression in Arabidopsis endosperm
10.5 3.2 3.3 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.6 -2.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.2 -3.0 -3.4 SRP157719 SRR7688912 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
10.0 -2.8 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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