CoexViewer
Coexpression detail for AT5G56980 and ASAT1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT5G56980 | cotton fiber protein | 835800 | At5g56980 | 0.72 | 4.64 | 3.77 | 4.26 | 48.00 | 4.69 | 3.27 | 2.79 | 3.15 | -0.36 | 2.04 | |
| ath | ASAT1 | acyl-CoA sterol acyl transferase 1 | 824360 | At3g51970 | 0.72 |
|
coex z = 3.7681 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 835800 (z-scored expression) |
824360 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.7 | -5.3 | -4.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 21.4 | -3.5 | -6.1 | SRP103817 | SRR5444399 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 19.5 | -5.5 | -3.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 16.0 | -4.1 | -3.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 16.0 | 5.0 | 3.2 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.9 | -2.0 | -8.0 | SRP277946 | SRR12469850 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.5 | -2.8 | -5.6 | SRP091641 | SRR4426978 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.7 | -4.8 | -2.9 | SRP339340 | SRR16119343 | Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction |
| 13.7 | -3.6 | -3.8 | SRP093913 | SRR5054306 | Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis |
| 13.5 | -2.4 | -5.6 | SRP091641 | SRR4449300 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.4 | 3.9 | 3.4 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 13.3 | -3.4 | -3.9 | SRP272650 | SRR12272429 | Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity |
| 13.1 | -3.5 | -3.7 | SRP277946 | SRR12469866 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.0 | -3.3 | -3.9 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.9 | -2.8 | -4.7 | SRP073485 | SRR3401801 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 12.7 | 3.6 | 3.5 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 12.6 | 5.8 | 2.2 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 12.5 | 3.4 | 3.7 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 12.4 | -3.0 | -4.1 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 12.3 | -3.6 | -3.4 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.7 | -3.2 | -3.7 | SRP337622 | SRR15931267 | Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency |
| 11.6 | -3.4 | -3.4 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.4 | -3.0 | -3.4 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.1 | -2.3 | -4.3 | SRP150217 | SRR7289585 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
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