CoexViewer
Coexpression detail for AT5G57655 and BGAL4
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT5G57655 | xylose isomerase family protein | 835871 | At5g57655 | 0.93 | 6.53 | 7.41 | 3.90 | 15.40 | 1.16 | 4.34 | 2.26 | 3.86 | 3.01 | 4.21 | |
| ath | BGAL4 | beta-galactosidase 4 | 835789 | At5g56870 | 0.93 |
|
coex z = 7.4096 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 835871 (z-scored expression) |
835789 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 25.3 | -5.3 | -4.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 24.6 | -5.3 | -4.6 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 21.9 | -5.9 | -3.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 18.8 | 4.0 | 4.7 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 17.0 | -3.4 | -5.1 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 13.1 | -3.0 | -4.4 | SRP277946 | SRR12469640 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | -3.7 | -3.3 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 12.1 | -4.0 | -3.1 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 11.3 | 3.3 | 3.5 | SRP091641 | SRR4426794 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.3 | -2.7 | -4.2 | SRP126574 | SRR6369407 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 11.1 | 3.1 | 3.6 | SRP091641 | SRR4426534 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.6 | 3.5 | 3.1 | SRP277946 | SRR12470059 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.5 | -3.4 | -3.1 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.4 | 3.5 | 3.0 | SRP071947 | SRR3234398 | Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I] |
| 10.3 | -3.8 | -2.7 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 10.3 | 3.6 | 2.9 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.3 | -3.6 | -2.9 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
The preparation time of this page was 0.8 [sec].
