CoexViewer
Coexpression detail for AT5G57655 and UGE1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT5G57655 | xylose isomerase family protein | 835871 | At5g57655 | 0.93 | 8.03 | 8.76 | 5.13 | 2.00 | 2.52 | 4.66 | 4.14 | 3.92 | 3.76 | 6.55 | |
| ath | UGE1 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | 837834 | At1g12780 | 0.93 |
|
coex z = 8.7565 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 835871 (z-scored expression) |
837834 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 33.7 | -5.9 | -5.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 27.9 | -5.3 | -5.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 19.7 | -5.3 | -3.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 15.7 | -4.0 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.4 | 4.0 | 3.6 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 14.1 | -3.6 | -3.9 | ERP123539 | ERR4471735 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.1 | -3.6 | -3.9 | ERP123539 | ERR4471734 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.1 | -3.7 | -3.6 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 13.0 | -3.4 | -3.8 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.6 | 3.5 | 3.6 | SRP071947 | SRR3234398 | Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I] |
| 12.2 | -3.8 | -3.2 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 11.9 | -3.6 | -3.3 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 11.7 | -3.4 | -3.5 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.8 | -3.4 | -3.2 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 10.7 | 3.6 | 3.0 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.7 | 3.5 | 3.1 | SRP277946 | SRR12470059 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.5 | -3.4 | -3.1 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.5 | -2.7 | -3.9 | ERP123539 | ERR4471738 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.5 | -2.7 | -3.9 | ERP123539 | ERR4471739 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.4 | 3.7 | 2.8 | SRP114806 | SRR5894654 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.1 | -2.8 | -3.6 | SRP091641 | SRR4426632 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.1 | -2.9 | -3.5 | SRP285119 | SRR12698780 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
The preparation time of this page was 0.8 [sec].
