CoexViewer
Coexpression detail for AT1G05710 and CLE41
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT1G05710 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 837078 | At1g05710 | 0.4 | 3.60 | 2.85 | 3.37 | 5606.70 | 1.73 | 2.05 | 1.70 | -1.13 | -0.62 | 1.92 | |
| ath | CLE41 | CLAVATA3/ESR-RELATED 41 | 822075 | At3g24770 | 0.4 |
|
coex z = 2.8536 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 837078 (z-scored expression) |
822075 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 33.3 | -4.4 | -7.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 27.9 | 4.7 | 6.0 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 24.8 | 4.3 | 5.7 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 19.5 | -4.8 | -4.1 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 18.5 | -6.0 | -3.1 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 16.0 | 3.2 | 5.0 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 14.8 | 3.8 | 3.8 | SRP103736 | SRR5440841 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 14.2 | -3.7 | -3.8 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 13.5 | -3.3 | -4.1 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 13.2 | -3.0 | -4.5 | SRP114806 | SRR5894775 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 13.2 | -3.5 | -3.8 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.7 | -3.5 | -3.6 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 12.6 | -4.2 | -3.0 | SRP100064 | SRR5263032 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 12.5 | -3.4 | -3.7 | SRP050945 | SRR1696859 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 12.3 | 2.8 | 4.3 | SRP266133 | SRR11934683 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 12.2 | -3.3 | -3.7 | SRP157719 | SRR7688912 | Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC] |
| 12.0 | -3.2 | -3.7 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 11.9 | -4.0 | -3.0 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.8 | -2.7 | -4.3 | SRP119072 | SRR6113963 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
| 11.7 | -4.1 | -2.9 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 11.6 | -3.5 | -3.4 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.3 | -3.0 | -3.8 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 11.2 | -2.6 | -4.3 | SRP155742 | SRR8699957 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 10.9 | -3.0 | -3.6 | SRP155742 | SRR8699976 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 10.9 | -3.2 | -3.4 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.6 | -3.4 | -3.1 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 10.6 | -3.6 | -3.0 | SRP114806 | SRR5894700 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.5 | -3.7 | -2.8 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.3 | -2.7 | -3.8 | SRP191093 | SRR8859571 | RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes. |
| 10.1 | -3.1 | -3.3 | SRP361288 | SRR18124820 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
The preparation time of this page was 0.7 [sec].
