CoexViewer
Coexpression detail for PPCK1 and SPX1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | PPCK1 | phosphoenolpyruvate carboxylase kinase 1 | 837387 | At1g08650 | 0.7 | 6.45 | 5.61 | 5.55 | 4.20 | 3.70 | 2.31 | 4.31 | 2.29 | 1.90 | 1.05 | |
| ath | SPX1 | SPX domain-containing protein 1 | 832137 | At5g20150 | 0.7 |
|
coex z = 5.6138 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 837387 (z-scored expression) |
832137 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 23.0 | -4.7 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 21.5 | 3.4 | 6.2 | SRP277946 | SRR12469766 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 20.9 | 4.0 | 5.2 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 18.4 | 3.2 | 5.8 | SRP277946 | SRR12469769 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 17.8 | 3.3 | 5.3 | SRP277946 | SRR12469767 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 17.1 | 2.8 | 6.0 | SRP277946 | SRR12469770 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.2 | 2.7 | 5.9 | SRP277946 | SRR12469768 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.6 | -4.3 | -3.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 13.8 | -3.6 | -3.8 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 13.3 | -3.8 | -3.5 | SRP073485 | SRR3401791 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 12.8 | -3.5 | -3.6 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 12.5 | 3.2 | 3.9 | SRP151817 | SRR7465450 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 12.3 | -3.6 | -3.4 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.3 | 4.0 | 3.1 | SRP090459 | SRR4295976 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 12.1 | -3.7 | -3.3 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.1 | -3.9 | -3.1 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.8 | -4.8 | -2.5 | SRP164718 | SRR7985402 | Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis |
| 11.6 | -3.5 | -3.3 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.2 | 3.1 | 3.6 | SRP151817 | SRR7465414 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 11.2 | -3.5 | -3.2 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 11.0 | 2.2 | 4.9 | SRP277946 | SRR12469639 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | -3.1 | -3.5 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.9 | -3.6 | -3.1 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.7 | -4.1 | -2.6 | SRP003799 | SRR068963 | Extensive imprinted gene expression in Arabidopsis endosperm |
| 10.7 | -3.1 | -3.5 | SRP091641 | SRR4426927 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.2 | 2.9 | 3.6 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.0 | 3.0 | 3.3 | SRP095347 | SRR5120428 | Genetic influences on gene expression in Arabidopsis thaliana |
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