CoexViewer

Coexpression detail for SUB and SUVR2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath SUB Leucine-rich repeat protein kinase family protein 837654 At1g11130 0.46 5.05 4.28 4.46 30.30 2.37 2.05 1.29 2.13 1.41 4.26
ath SUVR2 SET-domain containing protein lysine methyltransferase family protein 834422 At5g43990 0.46
Platform:

coex z = 4.2836



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 837654
(z-scored expression)		 834422
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.7 -6.2 -5.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.0 -3.9 -5.6 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
18.0 -4.4 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.4 -2.8 -6.2 ERP116123 ERR3414885 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
17.3 -4.9 -3.6 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
17.0 -4.4 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.5 -4.3 -3.8 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.5 -4.3 -3.8 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.1 -4.1 -3.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.3 -3.7 -3.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.2 -4.4 -3.2 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
14.0 -4.6 -3.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
13.7 -2.5 -5.6 SRP201971 SRR9331189 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
13.1 -3.0 -4.4 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.8 -3.3 -3.9 SRP339340 SRR16119310 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
12.8 -3.6 -3.5 SRP285119 SRR12698763 Time of day prioritizes the pool of translating mRNAs in response to heat stress
12.7 -3.7 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.6 -3.2 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.3 -3.6 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 -3.4 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.8 -3.4 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.7 -2.8 -4.1 SRP125388 SRR6312315 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.5 -3.1 -3.8 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.5 -3.1 -3.8 SRP091641 SRR4426893 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.5 -3.1 -3.8 SRP091641 SRR4426950 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 -4.9 -2.3 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.1 -3.1 -3.5 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.1 -3.1 -3.6 SRP238084 SRR10733480 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
10.9 -2.9 -3.8 SRP187062 SRR8645799 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
10.9 4.0 2.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 -2.9 -3.7 SRP093695 SRR5038570 Infection of Arabidopsis thaliana seedlings (Col-0, UBQ10::YFP-TCP14-4, tcp14-6 and coi1-16) with the Pseudomonas syringae strain DC3000 cor-
10.7 -3.2 -3.3 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 2.5 4.1 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 -2.8 -3.6 SRP346154 SRR16948976 Plants grow in lunar regolith
10.1 -2.8 -3.6 SRP151348 SRR7429877 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
10.0 -3.1 -3.3 SRP097877 SRR5205637 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 -3.0 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.0 -2.7 -3.7 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
Note: Samples whose contribution is more than 10 are outputted.



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