CoexViewer
Coexpression detail for AT1G13750 and scpl16
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT1G13750 | Purple acid phosphatases superfamily protein | 837935 | At1g13750 | 0.4 | 6.11 | 6.68 | 3.02 | |
| ath | scpl16 | serine carboxypeptidase-like 16 | 820402 | At3g12220 | 0.4 |
|
coex z = 6.678 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 837935 (z-scored expression) |
820402 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 18.3 | -6.0 | -3.0 | SRP155742 | SRR8699976 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 17.4 | -3.2 | -5.4 | SRP119072 | SRR6113963 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
| 17.1 | -3.2 | -5.3 | SRP277946 | SRR12470084 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.1 | -2.9 | -4.9 | SRP083970 | SRR4115362 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 13.6 | -3.5 | -3.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 13.1 | -2.9 | -4.5 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 11.5 | -2.4 | -4.8 | SRP090458 | SRR4295856 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 11.4 | -3.7 | -3.1 | ERP116123 | ERR3414706 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.4 | 3.5 | 3.0 | SRP238086 | SRR10733509 | mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession |
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