CoexViewer
Coexpression detail for BXL2 and XTH15
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | BXL2 | beta-xylosidase 2 | 837940 | At1g02640 | 0.68 | 4.58 | 3.55 | 4.36 | 19.20 | 3.16 | 3.37 | 1.36 | 1.14 | 1.20 | 0.78 | |
| ath | XTH15 | xyloglucan endotransglucosylase/hydrolase 15 | 827051 | At4g14130 | 0.68 |
|
coex z = 3.5519 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 837940 (z-scored expression) |
827051 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 27.7 | -3.7 | -7.5 | SRP277946 | SRR12469767 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 19.1 | -4.2 | -4.5 | SRP277946 | SRR12469639 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 18.4 | 4.9 | 3.8 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 16.8 | -3.9 | -4.3 | SRP277946 | SRR12469643 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.4 | -3.9 | -4.2 | SRP277946 | SRR12469769 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.2 | -3.7 | -4.3 | SRP277946 | SRR12469770 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.7 | -5.2 | -3.0 | SRP234036 | SRR10560286 | Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM) |
| 14.8 | -4.0 | -3.7 | SRP277946 | SRR12469641 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.4 | -3.9 | -3.7 | SRP277946 | SRR12469642 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.7 | -5.1 | -2.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 12.8 | -3.5 | -3.7 | SRP277946 | SRR12469968 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.5 | -3.4 | -3.7 | SRP277946 | SRR12469640 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.4 | -5.0 | -2.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 12.2 | -3.6 | -3.4 | SRP285090 | SRR12697077 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 11.8 | -2.9 | -4.1 | SRP090913 | SRR8185482 | WallOmics |
| 11.5 | 2.0 | 5.7 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.1 | -3.6 | -3.1 | SRP277946 | SRR12469969 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.0 | 2.2 | 5.0 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.6 | -2.0 | -5.3 | SRP097877 | SRR5205677 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.6 | -3.3 | -3.2 | SRP277946 | SRR12469768 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.3 | -2.9 | -3.6 | SRP294481 | SRR13156692 | RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition |
| 10.2 | -3.9 | -2.6 | SRP100064 | SRR5263150 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 10.0 | -2.9 | -3.5 | SRP114806 | SRR5894639 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
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