CoexViewer

Coexpression detail for AT1G18680 and AT5G19030
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G18680 HNH endonuclease domain-containing protein 838449 At1g18680 0.32 5.93 4.90 5.36 620.80 1.38 2.47 3.31 0.56 1.31 1.62
ath AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein 832022 At5g19030 0.32
Platform:

coex z = 4.8988



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 838449
(z-scored expression)		 832022
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
44.2 -7.0 -6.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
20.4 -5.6 -3.7 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
20.1 -4.5 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.1 -3.5 -4.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
17.0 -3.5 -4.8 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
15.1 -3.8 -3.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.7 -4.0 -3.5 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.5 3.8 3.5 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
13.4 -3.8 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.3 3.6 3.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.0 -3.8 -3.4 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
12.8 -4.0 -3.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.7 -3.5 -3.7 SRP060432 SRR2088870 MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root
12.6 -3.4 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.5 -3.0 -4.1 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.5 -3.5 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
12.4 -3.4 -3.6 SRP119072 SRR6113995 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
12.2 -4.1 -3.0 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
12.1 -4.3 -2.8 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
11.9 -3.7 -3.2 SRP234036 SRR10560326 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
11.9 -3.7 -3.3 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.5 3.3 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.4 -3.3 -3.5 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.3 3.3 3.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.3 -3.0 -3.7 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.3 3.5 3.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -3.1 -3.6 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 -3.4 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.0 -3.4 -3.2 SRP114806 SRR5894467 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 -3.3 -3.4 SRP051513 SRR1734309 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
11.0 3.3 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.9 -3.2 -3.4 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.9 -3.5 -3.1 SRP258701 SRR11614769 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
10.9 -3.8 -2.9 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.7 3.7 2.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.7 3.7 2.9 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.6 -3.5 -3.0 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.5 -2.7 -3.8 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.5 -3.4 -3.0 SRP151817 SRR7465449 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
10.5 -2.8 -3.7 SRP157719 SRR7688898 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
10.2 3.1 3.3 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 -3.4 -3.0 SRP148699 SRR7204075 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.1 3.3 3.1 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.1 -4.3 -2.4 SRP345854 SRR16934651 Phytochrome B regulates reactive oxygen signaling during stress in plants.
10.1 -3.3 -3.0 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
Note: Samples whose contribution is more than 10 are outputted.



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