CoexViewer

Coexpression detail for AT1G03250 and CCT2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G03250 R3H domain protein 838557 At1g03250 0.65 5.61 5.91 3.79 137.30 1.72 3.57 1.65 1.50 1.17 3.73
ath CCT2 phosphorylcholine cytidylyltransferase2 827179 At4g15130 0.65
Platform:

coex z = 5.9131



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 838557
(z-scored expression)		 827179
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
29.1 -6.2 -4.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.3 -5.2 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
24.3 -5.3 -4.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.1 -4.6 -4.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.4 -4.1 -4.2 SRP100712 SRR5285778 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
17.1 4.3 4.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.7 -4.3 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.6 5.6 2.9 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.3 -3.9 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.9 -3.8 -3.9 SRP101274 SRR5308920 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
14.5 -3.9 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.4 -3.8 -3.8 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
14.4 -3.9 -3.7 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.4 3.8 3.8 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.2 -3.6 -4.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.9 -3.9 -3.6 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.8 -2.9 -4.7 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
13.4 -3.1 -4.3 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.1 -3.8 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.1 -3.7 -3.6 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
13.0 3.6 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.8 3.7 3.5 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 -3.6 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
12.4 3.6 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.4 3.6 3.4 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 -3.4 -3.5 SRP065994 SRR2932456 Identification of plant vacuolar transporters mediating phosphate storage
12.2 3.5 3.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.2 3.4 3.6 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 3.6 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.9 3.5 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 -3.4 -3.5 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
11.6 -3.2 -3.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 -3.3 -3.5 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.3 -3.5 -3.3 SRP101641 SRR5330626 Chloroplast signalling gates thermotolerance in Arabidopsis
11.0 3.5 3.1 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 -2.6 -4.2 SRP100712 SRR5285741 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.8 3.6 3.0 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.8 -3.5 -3.1 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.8 -3.5 -3.1 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
10.7 5.1 2.1 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.7 -3.5 -3.1 ERP115370 ERR3333436 Arabidopsis tissue atlas
10.6 3.6 2.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 3.5 3.0 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.6 3.3 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.5 -4.3 -2.5 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.5 3.4 3.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.5 -2.9 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.2 3.4 3.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.1 3.2 3.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.1 3.3 3.1 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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