CoexViewer
Coexpression detail for AT1G21010 and AT1G18390
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT1G21010 | poly polymerase | 838695 | At1g21010 | 0.5 | 3.13 | 2.49 | 2.93 | 551.10 | 2.01 | 1.58 | 1.25 | 2.02 | 2.27 | -0.39 | |
| ath | AT1G18390 | Serine/Threonine kinase family catalytic domain protein | 838420 | At1g18390 | 0.5 |
|
coex z = 2.4878 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 838695 (z-scored expression) |
838420 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 25.3 | -3.5 | -7.3 | SRP100064 | SRR5263230 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 19.3 | -4.8 | -4.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.8 | -4.4 | -4.0 | SRP258701 | SRR11614791 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 16.5 | -3.7 | -4.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 15.4 | -5.8 | -2.7 | SRP100064 | SRR5263228 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 15.3 | -3.2 | -4.8 | SRP132865 | SRR6726416 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 14.8 | -4.0 | -3.7 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 14.6 | 3.4 | 4.3 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.8 | -3.9 | -3.6 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 13.7 | -4.1 | -3.4 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 13.3 | 3.1 | 4.3 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.0 | -3.9 | -3.3 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 12.6 | -3.0 | -4.2 | SRP266133 | SRR11934703 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.9 | -3.3 | -3.6 | SRP266133 | SRR11934437 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.8 | -4.2 | -2.8 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 11.7 | -3.7 | -3.2 | SRP266133 | SRR11934552 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.7 | -3.1 | -3.8 | SRP258701 | SRR11614758 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 11.7 | -3.0 | -3.9 | SRP282437 | SRR12642173 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 11.0 | 3.0 | 3.6 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 10.6 | -2.6 | -4.1 | SRP266133 | SRR11934512 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.5 | -2.5 | -4.2 | ERP115370 | ERR3333436 | Arabidopsis tissue atlas |
| 10.4 | -3.0 | -3.4 | SRP150217 | SRR7289585 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | -3.4 | -3.0 | SRP069198 | SRR3139508 | The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergence |
| 10.2 | -5.8 | -1.8 | SRP100064 | SRR5263232 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 10.1 | -3.5 | -2.9 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.1 | -2.6 | -3.8 | SRP266133 | SRR11934700 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.1 | 2.8 | 3.6 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
The preparation time of this page was 0.8 [sec].
