CoexViewer

Coexpression detail for AT1G21050 and LSH6
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G21050 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 838699 At1g21050 0.64 5.03 4.35 4.35 80.50 1.73 0.90 4.53 2.96 0.25 3.61
ath LSH6 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 837220 At1g07090 0.64
Platform:

coex z = 4.3501



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 838699
(z-scored expression)		 837220
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.6 6.5 5.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
29.3 5.9 5.0 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
26.1 -4.2 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.5 -5.1 -4.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.0 -4.3 -4.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
17.6 -4.9 -3.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.6 4.3 3.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.1 -4.9 -3.1 SRP266133 SRR11934452 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.3 -3.3 -4.3 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.6 -3.7 -3.7 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.5 -3.3 -4.1 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.1 -4.1 -3.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.5 3.8 3.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 3.5 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.1 -3.3 -3.6 ERP118109 ERR3624352 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.1 -3.6 -3.3 SRP100064 SRR5263051 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
12.0 3.5 3.5 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 3.6 3.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -2.7 -4.4 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.2 -2.9 -3.9 SRP258701 SRR11614775 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.1 -3.8 -2.9 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.1 -4.2 -2.6 SRP126574 SRR6369364 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.9 -3.6 -3.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -2.7 -3.9 SRP097877 SRR5205781 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 -2.4 -4.3 SRP371011 SRR18808243 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.2 -3.6 -2.9 SRP234036 SRR10560336 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
10.2 -3.4 -3.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.1 -3.3 -3.0 ERP118109 ERR3624354 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.1 -3.0 -3.4 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.1 -2.3 -4.4 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.1 -2.3 -4.4 ERP116123 ERR3414889 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.1 2.9 3.5 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -2.3 -4.4 SRP114806 SRR5894406 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 -2.7 -3.7 SRP222258 SRR15122077 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
Note: Samples whose contribution is more than 10 are outputted.



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