CoexViewer

Coexpression detail for CSLA03 and RAB8C
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath CSLA03 cellulose synthase-like A3 838956 At1g23480 0.59 4.52 4.40 3.41 57.40 0.80 2.29 2.96 3.21 -0.20 2.88
ath RAB8C RAB GTPase homolog 8C 831817 At5g03520 0.59
Platform:

coex z = 4.4



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 838956
(z-scored expression)		 831817
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
39.9 -6.2 -6.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.9 -5.2 -5.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.4 4.3 5.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
21.6 -4.7 -4.6 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
19.5 -4.0 -4.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
19.4 -3.9 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.3 -2.7 -6.0 ERP115370 ERR3333443 Arabidopsis tissue atlas
14.9 -4.2 -3.5 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.3 -3.2 -4.5 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.9 -3.5 -4.0 SRP132865 SRR6726416 Molecular basis of flowering under natural long-day conditions in Arabidopsis
13.8 -4.2 -3.3 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.7 -3.6 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.6 -4.0 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.4 3.8 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.0 -3.8 -3.4 SRP132865 SRR6726414 Molecular basis of flowering under natural long-day conditions in Arabidopsis
12.9 -3.4 -3.8 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.4 3.3 3.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -3.4 -3.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.4 5.2 2.4 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.3 -3.2 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.1 -2.8 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.0 -3.5 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.0 3.5 3.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
11.9 -3.4 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -3.3 -3.5 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.8 2.4 5.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.7 -2.8 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.5 2.9 3.9 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 3.1 3.7 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -3.2 -3.5 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
11.1 -3.3 -3.3 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.0 -3.2 -3.5 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 -3.4 -3.3 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 2.7 3.9 SRP127000 SRR6388213 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
10.7 -2.9 -3.7 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.5 -3.0 -3.5 SRP065994 SRR2932456 Identification of plant vacuolar transporters mediating phosphate storage
10.5 3.2 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.0 -3.4 SRP100064 SRR5263032 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.4 -2.8 -3.7 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 3.2 3.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -4.7 -2.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.3 -2.7 -3.8 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.2 3.0 3.4 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 2.9 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 3.3 3.1 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.6 -2.8 SRP257291 SRR11568018 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
Note: Samples whose contribution is more than 10 are outputted.



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