CoexViewer

Coexpression detail for ALB4 and CAF1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ALB4 OxaA/YidC-like membrane insertion protein 839065 At1g24490 0.7 7.04 6.01 6.17 134.40 1.06 2.24 3.13 1.51 1.98 5.12
ath CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 816521 At2g20020 0.7
Platform:

coex z = 6.0129



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839065
(z-scored expression)		 816521
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
43.4 -6.6 -6.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
39.7 -7.1 -5.6 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
27.8 -4.5 -6.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
26.1 -5.0 -5.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.9 -4.9 -4.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.3 4.7 4.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.0 -4.2 -4.5 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.9 -3.8 -4.5 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
16.8 4.3 3.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.2 4.9 3.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.3 3.8 4.0 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.8 -4.2 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.4 -4.1 -3.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.3 3.9 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -4.1 -3.4 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
13.6 3.6 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.0 3.9 3.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 -1.6 -8.0 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.8 -3.8 -3.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.5 3.8 3.3 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.4 3.3 3.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -3.6 -3.5 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.3 3.6 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.1 -3.0 -4.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.8 -3.5 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.6 3.4 3.4 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.5 3.5 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 3.5 3.2 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 -3.6 -3.1 SRP047300 SRR1580554 Identification of CLF-regulated transcripts using strand-specific RNA-sequencing in Arabidopsis
11.0 -3.4 -3.2 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
11.0 3.2 3.4 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.8 -2.9 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.9 -3.7 -2.9 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 3.2 3.4 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.4 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.8 -3.7 -2.9 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
10.6 -3.3 -3.2 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
10.6 -3.3 -3.2 SRP285090 SRR12697085 Differential alteration of plant functions by homologous fungal candidate effectors
10.5 -3.3 -3.2 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.5 -3.4 -3.1 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.5 3.3 3.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.5 -3.1 -3.4 SRP091641 SRR4426941 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.4 3.3 3.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.4 -3.3 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.5 -3.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 2.9 3.5 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.3 -3.2 -3.3 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 -3.5 -3.0 SRP047525 SRR1586505 Transcriptome profiling of DCP5 using strand-specific RNA-sequencing in Arabidopsis
10.2 -3.3 -3.1 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.2 -2.9 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.0 -3.4 -2.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.0 -4.2 -2.4 SRP157719 SRR7688912 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
Note: Samples whose contribution is more than 10 are outputted.



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