CoexViewer

Coexpression detail for AT1G24996 and AT3G47675
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT1G24996 uncharacterized protein 839092 At1g24996 0.47 9.43 10.20 1.60
ath AT3G47675 ternary complex factor MIP1 leucine-zipper protein 2745949 At3g47675 0.47
Platform:

coex z = 10.2031



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839092
(z-scored expression)		 2745949
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
42.7 6.4 6.6 SRP101274 SRR5308969 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
40.2 6.4 6.3 SRP101274 SRR5308983 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
38.4 6.6 5.8 SRP101274 SRR5308982 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
29.3 6.4 4.6 SRP101274 SRR5308980 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
27.3 4.8 5.7 SRP301115 SRR13397378 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
22.7 -4.0 -5.7 SRP126574 SRR6369409 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
22.7 -4.0 -5.7 SRP126574 SRR6369357 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
21.7 -3.8 -5.7 SRP126574 SRR6369435 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
20.7 -6.0 -3.4 SRP126574 SRR6369383 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
19.3 -4.3 -4.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
17.3 -4.7 -3.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
16.0 -3.5 -4.6 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.3 -4.5 -3.4 SRP126574 SRR6369552 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
15.2 4.1 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.8 -4.2 -3.5 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
14.8 -2.9 -5.2 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.8 4.0 3.7 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 4.2 3.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 -3.8 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.4 -4.4 -3.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
14.0 4.1 3.4 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.1 3.9 3.3 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.1 -3.6 -3.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.1 -3.8 -3.4 SRP126574 SRR6369539 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.8 -3.7 -3.4 SRP126574 SRR6369461 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.7 3.8 3.3 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.7 3.6 3.5 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 3.9 3.2 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.3 -3.6 -3.4 SRP126574 SRR6369500 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.2 -2.1 -6.0 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.2 -3.5 -3.5 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 -3.7 -3.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.0 -4.3 -2.8 SRP126574 SRR6369513 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.9 3.8 3.1 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.9 -4.2 -2.9 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
11.9 -3.7 -3.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.7 3.9 3.0 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 4.3 2.7 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -3.0 -3.8 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.4 -4.8 -2.4 SRP126574 SRR6369526 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.4 -4.0 -2.9 SRP119072 SRR6113963 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.4 -3.9 -2.9 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.4 -4.1 -2.8 SRP126574 SRR6369396 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.4 -3.4 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.2 4.2 2.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -3.4 -3.3 SRP055192 SRR1811536 Arabidopsis thaliana Raw sequence reads
11.1 -4.1 -2.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
11.0 -2.9 -3.7 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.9 3.4 3.2 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.9 -2.7 -4.0 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.8 -3.1 -3.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.8 3.4 3.2 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 3.8 2.8 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 6.4 1.7 SRP122518 SRR6230505 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
10.7 3.6 3.0 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
10.6 3.7 2.9 SRP188202 SRR8714016 Genome-wide binding of Arabidopsis growth regulating factors uncovers their broad regulatory functions in plant growth, development and stress response [RNA-Seq]
10.4 -3.2 -3.3 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.4 4.5 2.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.2 -3.3 -3.1 SRP277946 SRR12470085 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.4 -3.0 SRP191093 SRR8859571 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
10.1 -2.9 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.0 3.4 2.9 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 3.5 2.9 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
Note: Samples whose contribution is more than 10 are outputted.



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