CoexViewer

Coexpression detail for AT1G26520 and AT2G26810
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G26520 Cobalamin biosynthesis CobW-like protein 839192 At1g26520 0.28 6.23 5.80 4.99 35.80 2.71 1.28 3.63 4.03 0.34 1.46
ath AT2G26810 Putative methyltransferase family protein 817222 At2g26810 0.28
Platform:

coex z = 5.7967



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839192
(z-scored expression)		 817222
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.6 -6.1 -5.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
24.6 -5.3 -4.7 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
23.6 -3.9 -6.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
19.8 -5.4 -3.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.7 -4.3 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.6 -4.0 -4.2 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
16.6 -4.8 -3.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.3 -3.7 -4.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.3 -3.7 -4.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.0 -4.4 -3.7 SRP104760 SRR5467208 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
14.7 -3.7 -4.0 SRP103817 SRR5444419 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
14.7 -3.3 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.6 -3.8 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.5 -3.1 -4.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.1 -1.8 -7.7 SRP091641 SRR4426347 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.1 -3.4 -4.1 SRP371011 SRR18808259 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
14.0 -3.5 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.6 -6.0 -2.3 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
13.2 -1.9 -6.8 ERP116123 ERR3414642 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.0 -2.8 -4.6 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.9 -5.7 -2.3 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
12.8 -5.2 -2.5 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.3 -3.5 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.2 -3.8 -3.2 SRP150864 SRR7367126 Contribution of time of day and the circadian clock to the heat stress responsive transcriptome in Arabidopsis
11.9 -3.1 -3.8 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.8 -4.2 -2.8 SRP154323 SRR7536204 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
11.8 -3.2 -3.7 SRP136812 SRR6919678 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
11.7 -4.5 -2.6 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.6 -3.6 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 -3.1 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -2.9 -3.9 SRP086629 SRR4175057 A global view of RNA-protein interactions reveals novel root hair cell fate regulators
11.3 -3.7 -3.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.3 -4.7 -2.4 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
11.0 -4.9 -2.3 SRP234036 SRR10560327 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
11.0 -5.0 -2.2 SRP100938 SRR5304381 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.8 -1.5 -7.3 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.7 3.2 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.3 -3.2 -3.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.3 -4.1 -2.5 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.0 2.6 3.8 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
Note: Samples whose contribution is more than 10 are outputted.



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