CoexViewer

Coexpression detail for AT1G26520 and AT5G40530
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G26520 Cobalamin biosynthesis CobW-like protein 839192 At1g26520 0.28 6.14 5.41 5.21 27.40 2.04 1.59 3.45 2.79 0.09 1.62
ath AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 834051 At5g40530 0.28
Platform:

coex z = 5.4143



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839192
(z-scored expression)		 834051
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
41.1 -6.1 -6.8 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
32.3 -6.0 -5.4 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
28.4 -5.7 -5.0 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
23.0 -5.3 -4.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
22.1 -4.7 -4.7 SRP126156 SRR6347981 Equal parental contribution to the transcriptome is not equal control of embryogenesis
20.1 -5.4 -3.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
19.0 -4.8 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.3 -3.7 -4.9 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.7 -4.5 -3.7 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
16.3 -3.9 -4.2 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
15.8 -3.3 -4.8 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.8 -4.3 -3.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.5 -3.4 -4.6 SRP371011 SRR18808259 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
15.2 -3.8 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -3.5 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.0 -6.2 -2.1 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.0 -5.2 -2.5 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.3 -4.5 -2.8 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.1 -3.2 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.9 -3.7 -3.2 SRP111550 SRR5817899 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
11.8 -3.7 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -3.1 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 -3.7 -3.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.1 -3.5 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.9 -3.3 -3.3 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.9 -3.3 -3.3 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.9 -3.6 -3.0 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 -4.1 -2.7 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.7 -2.8 -3.8 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.7 3.2 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -4.0 -2.7 ERP118109 ERR3624433 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.6 2.6 4.1 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.6 -3.5 -3.0 SRP315390 SRR14275192 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.6 -3.1 -3.4 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.3 -3.1 -3.3 SRP100080 SRR5264241 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
10.2 2.6 4.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 3.2 3.2 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 -4.0 -2.6 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.2 -2.6 -3.9 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -4.2 -2.4 SRP277946 SRR12469605 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.7 [sec].