CoexViewer
Coexpression detail for CYP78A8 and AT4G00880
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | CYP78A8 | cytochrome P450, family 78, subfamily A, polypeptide 8 | 839233 | At1g01190 | 0.18 | 5.34 | 4.17 | 5.08 | 916.70 | 2.26 | 1.22 | 0.43 | 0.74 | 0.05 | -0.44 | |
| ath | AT4G00880 | SAUR-like auxin-responsive protein family | 827989 | At4g00880 | 0.18 |
|
coex z = 4.1672 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 839233 (z-scored expression) |
827989 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.4 | -4.6 | -5.3 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 16.6 | -5.0 | -3.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 15.9 | -3.6 | -4.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.8 | -2.9 | -5.5 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.4 | -3.9 | -3.2 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.9 | -4.0 | -3.0 | SRP346154 | SRR16948976 | Plants grow in lunar regolith |
| 11.9 | -4.0 | -2.9 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.5 | -4.0 | -2.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | -3.1 | -3.3 | SRP266469 | SRR11954325 | RNA sequencing reveals the genetic relationship between TOPPs and its regulatory subunit PP1R3 in Arabidopsis thaliana |
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