CoexViewer

Coexpression detail for AT1G01180 and AT3G58390
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G01180 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 839239 At1g01180 0.48 3.48 -0.62 6.65 124.50 2.27 3.12 1.08 1.78 0.24 -0.81
ath AT3G58390 Eukaryotic release factor 1 (eRF1) family protein 825008 At3g58390 0.48
Platform:

coex z = -0.6217



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839239
(z-scored expression)		 825008
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
38.4 -5.7 -6.8 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
20.9 -5.0 -4.2 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
20.9 -4.4 -4.8 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.1 -4.2 -4.3 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
16.0 -3.7 -4.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
15.7 -2.7 -5.7 SRP065807 SRR2927349 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
15.2 -4.2 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.7 -2.8 -5.2 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
14.3 -4.4 -3.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.1 -3.3 -4.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.8 -3.8 -3.6 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 -2.2 -5.9 SRP277946 SRR12469918 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 3.7 3.3 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
12.1 -5.4 -2.2 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.9 -3.2 -3.7 SRP150997 SRR7405061 Calmodulin-binding transcription activator (CAMTA) 6 is a key regulator of Na+ homeostasis and salinity stress responses during early germination
11.1 -4.3 -2.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
11.1 3.2 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.0 -2.6 -4.2 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
10.8 3.6 3.0 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.7 -3.3 -3.3 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.0 -3.1 -3.3 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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