CoexViewer

Coexpression detail for AT1G01180 and AT1G15530
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G01180 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 839239 At1g01180 0.48 3.57 4.67 1.52 1931.20 1.51 1.57 1.20 0.91 -0.35 1.30
ath AT1G15530 Concanavalin A-like lectin protein kinase family protein 838123 At1g15530 0.48
Platform:

coex z = 4.666



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839239
(z-scored expression)		 838123
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.9 -5.7 -6.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.6 -4.4 -5.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.1 -4.4 -4.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.8 -4.2 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
17.4 -4.2 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.3 4.4 3.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.6 4.0 3.9 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 -4.3 -3.4 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
13.3 3.7 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.5 -3.8 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 3.6 3.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.3 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.8 -3.6 -3.3 SRP065994 SRR2932456 Identification of plant vacuolar transporters mediating phosphate storage
11.5 3.5 3.2 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -2.0 -5.8 SRP285902 SRR12747511 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
11.2 -4.9 -2.3 SRP058628 SRR2037336 Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
11.1 -5.4 -2.0 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.8 -2.9 -3.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.7 -2.4 -4.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.5 3.2 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.5 -3.1 -3.4 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.5 -3.0 -3.5 SRP073485 SRR3401812 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.5 -3.5 -3.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.4 -3.1 -3.3 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.3 -3.3 -3.2 SRP090913 SRR8185440 WallOmics
10.2 -3.2 -3.2 SRP150997 SRR7405061 Calmodulin-binding transcription activator (CAMTA) 6 is a key regulator of Na+ homeostasis and salinity stress responses during early germination
10.2 -5.0 -2.1 SRP360225 SRR18054365 RNAseq analysis of Arabidopsis thaliana apices of Col-0, ap2-12 and rAP2-VENUS plants at 1-cm bolting stage
10.2 -3.0 -3.4 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.2 -3.1 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -2.5 -4.1 SRP139506 SRR6982864 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
10.1 -3.0 -3.4 SRP086629 SRR4175056 A global view of RNA-protein interactions reveals novel root hair cell fate regulators
10.0 -1.7 -5.9 SRP277946 SRR12469567 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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