CoexViewer

Coexpression detail for AT1G01760 and AT1G03540
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G01760 denosine deaminases acting on tRNA 839252 At1g01760 0.2 5.03 3.12 5.59 14.50 1.38 2.34 2.53 3.31 1.26 2.35
ath AT1G03540 Pentatricopeptide repeat (PPR-like) superfamily protein 839466 At1g03540 0.2
Platform:

coex z = 3.1196



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839252
(z-scored expression)		 839466
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
29.9 -8.6 -3.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.3 -4.1 -6.9 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
23.0 -4.0 -5.8 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
20.8 -3.3 -6.3 SRP187381 SRR8662352 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
18.5 -3.4 -5.5 SRP026541 SRR925872 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
17.8 -4.3 -4.1 ERP116123 ERR3414642 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
17.3 -5.1 -3.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.3 -2.7 -6.3 SRP187381 SRR8662356 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
16.5 -3.5 -4.7 SRP277946 SRR12469806 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.9 -2.8 -5.7 SRP267137 SRR12005766 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
14.7 -4.3 -3.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.3 -2.3 -6.3 SRP187381 SRR8662353 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
14.0 -4.1 -3.4 SRP090459 SRR4296014 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.9 -3.3 -4.3 SRP090913 SRR4360366 WallOmics
13.6 -3.8 -3.6 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
13.6 -3.0 -4.5 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
13.4 -3.4 -4.0 SRP279992 SRR12582696 Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant
13.0 -5.4 -2.4 SRP163044 SRR7947128 Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA
12.2 -3.6 -3.4 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.1 -3.8 -3.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
12.1 3.8 3.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.0 -4.4 -2.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.0 -3.3 -3.6 SRP331164 SRR15347024 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
11.7 -2.8 -4.1 SRP282437 SRR12642226 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.2 -2.9 -3.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
11.0 -2.3 -4.7 SRP277946 SRR12469605 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 -2.3 -4.7 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -4.8 -2.3 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 -2.0 -5.5 SRP114806 SRR5894586 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 -3.8 -2.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.5 -2.8 -3.7 SRP261821 SRR11795798 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
10.5 -2.4 -4.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -4.8 -2.2 SRP285119 SRR12698825 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.4 -2.6 -4.0 SRP063017 SRR2221848 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.4 -2.7 -3.8 ERP115370 ERR3333436 Arabidopsis tissue atlas
10.3 -2.5 -4.1 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 -3.1 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.1 -0.9 -11.6 SRP158306 SRR7695030 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.0 -2.8 -3.5 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
Note: Samples whose contribution is more than 10 are outputted.



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