CoexViewer

Coexpression detail for PFC1 and AT5G02710
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath PFC1 Ribosomal RNA adenine dimethylase family protein 839283 At1g01860 0.29 7.75 8.34 5.06 28.10 2.15 3.67 2.05 3.18 1.69 3.78
ath AT5G02710 zinc/iron-chelating domain protein 831827 At5g02710 0.29
Platform:

coex z = 8.3408



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839283
(z-scored expression)		 831827
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.4 -5.6 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
18.3 -5.9 -3.1 SRP091641 SRR4426360 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
17.7 -4.3 -4.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.9 -4.0 -3.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.7 -3.9 -3.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.6 3.5 3.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 -4.3 -3.1 SRP149815 SRR7264708 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
13.4 -4.0 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.9 -3.0 -4.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.3 3.0 4.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 -3.7 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 -3.7 -3.2 SRP069198 SRR3139508 The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergence
12.1 -3.7 -3.2 SRP069198 SRR3139510 The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergence
12.0 -3.6 -3.3 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.0 -3.6 -3.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.0 -3.2 -3.7 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.9 -3.1 -3.8 SRP266133 SRR11934635 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 3.1 3.9 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.1 -3.8 SRP266133 SRR11934452 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 -3.1 -3.8 SRP266133 SRR11934658 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 -3.1 -3.8 SRP266133 SRR11934598 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.8 -3.8 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.7 -3.4 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 -4.0 -2.9 SRP214585 SRR9681606 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
11.4 -5.2 -2.2 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.4 -5.1 -2.2 SRP163044 SRR7947128 Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA
11.2 -2.2 -5.0 SRP357889 SRR17847293 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
11.1 2.6 4.3 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.6 3.0 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.8 -3.5 -3.1 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.8 -3.5 -3.1 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -5.5 -1.9 SRP267137 SRR12005730 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.7 -5.3 -2.0 SRP172180 SRR8275232 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
10.7 -4.5 -2.3 SRP100064 SRR5263035 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.7 -4.5 -2.3 SRP100064 SRR5263013 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.6 -4.0 -2.6 SRP333850 SRR15593616 Arabidopsis COILIN orchestrates transcriptional as well as post-transcriptional regulation to combat pathogens
10.3 -3.4 -3.1 SRP083970 SRR4115362 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.2 -5.9 -1.7 SRP091641 SRR4426531 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.1 -3.2 -3.2 SRP191813 SRR8875218 Investigation of different gene expression of putative tt mutants under AIC condition using RNA-seq
Note: Samples whose contribution is more than 10 are outputted.



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