CoexViewer
Coexpression detail for SOM and HAI3
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | SOM | Zinc finger C-x8-C-x5-C-x3-H type family protein | 839408 | At1g03790 | 0.03 | 5.08 | 2.19 | 6.60 | 6.70 | 3.90 | 5.52 | 4.80 | 2.88 | 1.30 | 3.68 | |
| ath | HAI3 | highly ABA-induced PP2C protein 3 | 817487 | At2g29380 | 0.03 |
|
coex z = 2.1885 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 839408 (z-scored expression) |
817487 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 14.8 | 4.5 | 3.3 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 14.3 | 3.9 | 3.7 | SRP193460 | SRR8944894 | Selective egg cell polyspermy bypasses the triploid block |
| 12.6 | 3.6 | 3.5 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 12.3 | -3.6 | -3.4 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 11.1 | 3.4 | 3.2 | SRP100712 | SRR5285781 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.9 | 4.7 | 2.3 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.8 | 3.4 | 3.2 | SRP100712 | SRR5285767 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.5 | 3.4 | 3.1 | SRP100712 | SRR5285720 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.2 | 3.3 | 3.1 | SRP100712 | SRR5285721 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
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