CoexViewer

Coexpression detail for RSL4 and EXPA7
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath RSL4 root hair defective 6-like 4 839667 At1g27740 0.03 12.96 11.03 11.38 18.30 4.41 3.57 3.73 1.44 2.03 7.49
ath EXPA7 expansin A7 837813 At1g12560 0.03
Platform:

coex z = 11.0345



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839667
(z-scored expression)		 837813
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
79.0 -7.2 -10.9 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
79.0 -7.2 -10.9 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
79.0 -7.2 -10.9 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
38.1 -3.5 -10.9 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
33.7 6.1 5.5 SRP091641 SRR4426973 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
33.7 6.1 5.5 SRP091641 SRR4426692 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
33.6 5.9 5.7 SRP326522 SRR15015712 Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana
28.7 -5.2 -5.6 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
28.7 5.9 4.8 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
26.0 -7.0 -3.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
25.8 5.4 4.8 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
23.3 4.6 5.1 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
23.2 5.2 4.5 SRP282437 SRR12642101 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
22.9 5.2 4.4 SRP372716 SRR18963408 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
21.6 4.2 5.2 SRP346154 SRR16948992 Plants grow in lunar regolith
20.2 -5.2 -3.9 SRP114806 SRR5894634 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
19.2 4.5 4.2 SRP306749 SRR13724781 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
17.8 -5.2 -3.5 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.8 -3.9 -4.3 SRP365283 SRR18430922 Time-series RNAseq analysis following lateral root induction by gravistimulation
16.7 -5.5 -3.0 SRP101641 SRR5330627 Chloroplast signalling gates thermotolerance in Arabidopsis
15.8 3.6 4.4 SRP047144 SRR1585305 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
15.8 4.1 3.8 SRP049951 SRR1654359 Transcriptional response to zebularine and mitomycin C (MMC) in wild type and ATR deficient Arabidopsis thaliana plants
15.5 4.2 3.7 SRP306748 SRR13724776 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_9_12]
14.5 -5.2 -2.8 SRP114806 SRR5894621 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.5 4.5 3.2 SRP271641 SRR12211732 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
14.4 -2.6 -5.5 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
14.3 -4.7 -3.0 SRP187455 SRR8666072 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
14.3 3.8 3.8 ERP106238 ERR2245560 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.0 4.1 3.4 SRP007484 SRR309183 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
13.9 -3.9 -3.6 SRP308553 SRR13805909 The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators
13.2 -5.1 -2.6 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
13.2 -5.2 -2.6 SRP114806 SRR5894470 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.2 4.2 3.1 ERP115370 ERR3333408 Arabidopsis tissue atlas
13.2 -3.9 -3.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.1 4.5 2.9 SRP047144 SRR1584414 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
12.9 4.1 3.1 SRP074436 SRR3478334 Arabidopsis thaliana treatments to trigger somatic embryo formation under RNAseq
12.8 -3.7 -3.5 SRP016025 SRR584120 Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the eukaryotic steady state transcriptome
12.8 3.8 3.3 SRP218723 SRR9995099 Plant 22-nt siRNAs mediate translational repression and stress adaptation
12.8 -3.4 -3.8 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
12.6 -3.5 -3.6 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
12.6 4.3 3.0 SRP098906 SRR5230988 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
12.5 3.3 3.8 SRP125388 SRR6312347 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
12.5 3.2 3.8 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.2 3.4 3.6 SRP125388 SRR6312358 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
12.2 3.6 3.4 SRP098906 SRR5230989 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
12.2 4.1 3.0 SRP218723 SRR9995098 Plant 22-nt siRNAs mediate translational repression and stress adaptation
12.1 4.7 2.6 SRP125057 SRR6294497 Genome-wide mapping of demethylase, REF6 binding targets and H3K27me3 marked regions as well as expression analysis in various Arabidopsis genetic backgrounds [RNA-seq]
12.1 4.1 2.9 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
12.0 -5.6 -2.2 SRP090458 SRR4295930 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.9 -5.5 -2.2 SRP101641 SRR5330634 Chloroplast signalling gates thermotolerance in Arabidopsis
11.8 4.1 2.9 SRP282437 SRR12642106 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.7 -4.0 -2.9 SRP119072 SRR6114010 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.7 3.3 3.6 SRP125388 SRR6312348 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.5 -4.4 -2.6 SRP110167 SRR5742217 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
11.5 -7.2 -1.6 SRP277946 SRR12470099 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 3.6 3.1 SRP068171 SRR3333598 Arabidopsis thaliana cultivar:Col Transcriptome or Gene expression
11.4 3.5 3.3 SRP112501 SRR5831030 Combining chemical and genetic approaches to increase drought resistance in plants
11.3 4.0 2.8 ERP115370 ERR3333403 Arabidopsis tissue atlas
11.3 3.2 3.5 SRP125388 SRR6312357 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.2 -4.0 -2.8 SRP044746 SRR3046819 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
11.2 3.9 2.9 SRP081055 SRR4010831 Temperature induced alternative splicing is affected in sdg8 and sdg26.
11.2 -3.4 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.2 3.5 SRP044776 SRR1523883 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
11.1 -3.3 -3.4 SRP100938 SRR5304737 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.1 4.2 2.6 SRP306740 SRR13724688 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
11.0 2.9 3.8 SRP082372 SRR4042631 Genomic architecture of biomass heterosis in Arabidopsis
10.9 -2.6 -4.1 SRP133385 SRR6767656 Time-course transcriptomic analysis of Arabidopsis response to high light stress
10.8 -3.4 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -3.8 -2.8 SRP161785 SRR7830355 Arabidopsis seedling hydroponic treatment with Streptomyces AGN23 culture supernatants
10.7 4.0 2.7 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.5 -3.4 -3.1 SRP357889 SRR17847298 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
10.5 3.8 2.7 ERP115370 ERR3333409 Arabidopsis tissue atlas
10.3 -1.6 -6.3 SRP066432 SRR2925751 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
10.3 3.5 2.9 SRP282437 SRR12642144 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.1 2.5 4.1 SRP044776 SRR1523884 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
Note: Samples whose contribution is more than 10 are outputted.



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