CoexViewer

Coexpression detail for AT1G29980 and AT2G28790
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G29980 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) 839877 At1g29980 0.54 6.19 4.98 5.72 56.90 3.32 3.74 2.90 0.92 3.13 4.48
ath AT2G28790 Pathogenesis-related thaumatin superfamily protein 817428 At2g28790 0.54
Platform:

coex z = 4.9819



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839877
(z-scored expression)		 817428
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
27.9 -5.4 -5.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
23.5 4.9 4.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
19.3 4.2 4.6 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.7 -3.7 -4.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
17.4 4.3 4.0 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.3 -4.4 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.8 -3.9 -4.0 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.3 -4.0 -3.9 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
14.3 -3.5 -4.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.3 -4.8 -3.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.7 -2.7 -5.0 SRP091641 SRR4426432 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.3 -2.8 -4.8 SRP220476 SRR10072757 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
13.1 -2.0 -6.5 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
13.1 -2.6 -5.0 SRP091641 SRR4426582 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.4 -4.1 -3.0 SRP279992 SRR12582696 Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant
12.3 -3.3 -3.7 SRP266133 SRR11934496 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.3 -3.3 -3.7 SRP266133 SRR11934418 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.3 -3.3 -3.7 SRP266133 SRR11934504 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.3 -3.3 -3.7 SRP266133 SRR11934541 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.3 -3.3 -3.7 SRP266133 SRR11934580 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.1 -3.3 -3.7 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
12.0 -2.4 -5.0 SRP091641 SRR4426531 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.8 -3.7 -3.2 SRP149815 SRR7266015 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
11.7 -5.4 -2.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
11.7 3.5 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.6 -3.9 -3.0 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.6 -5.3 -2.2 SRP285119 SRR12698782 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.5 -3.4 -3.4 SRP277946 SRR12470079 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 4.1 2.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.2 -3.3 -3.4 SRP239091 SRR10804768 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
11.1 -3.4 -3.3 SRP090458 SRR4295949 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.0 -3.9 -2.8 SRP277946 SRR12469999 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 3.3 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.7 -2.2 -5.0 SRP091641 SRR4426581 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 3.1 3.5 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.6 -2.9 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 -3.3 -3.2 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.5 -4.5 -2.4 SRP229078 SRR10416624 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
10.1 -3.4 -3.0 SRP097877 SRR5205675 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 3.8 2.7 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 -3.5 -2.8 SRP187381 SRR8662284 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
Note: Samples whose contribution is more than 10 are outputted.



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