CoexViewer

Coexpression detail for AT1G29980 and AT3G53190
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G29980 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) 839877 At1g29980 0.54 6.48 5.03 6.16 82.30 2.42 4.17 2.04 0.98 1.57 4.30
ath AT3G53190 Pectin lyase-like superfamily protein 824485 At3g53190 0.54
Platform:

coex z = 5.0318



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839877
(z-scored expression)		 824485
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
40.7 -5.4 -7.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.1 4.9 5.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
22.9 4.2 5.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
21.0 -4.8 -4.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.5 4.3 4.5 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.9 -4.4 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.7 -3.9 -4.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.8 -3.3 -4.8 SRP187719 SRR8689395 Transcriptomic analysis of pip5k1 pip5k2 mutant and wild type plants before or after inoculation with powdery mildew Erysiphe cichoracearum
15.7 -3.7 -4.2 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.9 -4.0 -3.5 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
13.5 -4.0 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.4 -5.4 -2.5 ERP115370 ERR3333443 Arabidopsis tissue atlas
12.7 -4.1 -3.1 SRP185814 SRR8570492 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
12.6 -3.5 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 -3.4 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 3.3 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.5 -3.3 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.5 3.8 3.0 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.4 -3.9 -2.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.2 -2.9 -3.9 SRP105064 SRR5469589 High-resolution gene expression datasets of ontogenetic zones in the root apical meristem
10.8 -3.2 -3.4 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 -5.3 -2.0 SRP285119 SRR12698782 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.4 -2.9 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.3 -3.1 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
10.2 -3.4 -3.0 SRP090458 SRR4295949 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.1 4.1 2.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 -3.3 -3.0 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.0 -2.7 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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