CoexViewer

Coexpression detail for AT1G29980 and AT4G38660
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G29980 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) 839877 At1g29980 0.54 5.08 4.27 4.51 9.90 2.45 3.52 2.20 2.24 1.54 6.02
ath AT4G38660 Pathogenesis-related thaumatin superfamily protein 830022 At4g38660 0.54
Platform:

coex z = 4.2669



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839877
(z-scored expression)		 830022
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.5 -5.4 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.6 4.9 4.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
21.6 -5.4 -4.0 ERP115370 ERR3333443 Arabidopsis tissue atlas
20.7 -3.6 -5.7 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
19.3 4.2 4.6 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
18.8 -4.8 -4.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.8 -3.5 -5.3 SRP091641 SRR4426789 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
18.1 4.3 4.2 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.9 -4.4 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.4 -4.0 -3.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.6 -3.7 -3.7 SRP238084 SRR10733480 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
13.6 3.8 3.6 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
13.5 -3.9 -3.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.3 -4.0 -3.3 SRP100064 SRR5263008 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
13.3 -3.2 -4.2 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.9 -3.9 -3.3 SRP277946 SRR12470034 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 -3.5 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.7 3.3 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.3 -3.4 -3.7 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 -3.4 -3.5 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.8 -2.8 -4.2 SRP100938 SRR5304640 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.7 -5.3 -2.2 SRP285119 SRR12698782 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.5 -3.4 -3.4 SRP277946 SRR12470035 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -2.2 -5.3 SRP091641 SRR4426581 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.4 -3.9 -2.9 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.3 -2.0 -5.6 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.2 -3.4 -3.3 SRP097877 SRR5205675 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 -3.7 -2.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.8 -2.9 -3.8 SRP371011 SRR18808261 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.5 -3.7 -2.9 SRP154321 SRR7536106 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.5 -3.3 -3.1 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.3 -3.3 -3.2 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
10.3 -3.3 -3.1 SRP266133 SRR11934692 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.3 -3.3 -3.1 SRP266133 SRR11934621 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.3 -3.3 -3.1 SRP266133 SRR11934504 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.3 3.5 2.9 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.3 3.5 2.9 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 -3.4 -3.0 SRP090458 SRR4295949 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.2 3.4 2.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.1 -3.7 -2.8 SRP100064 SRR5263005 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.1 -3.1 -3.2 SRP100064 SRR5263007 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.1 -4.1 -2.4 SRP185814 SRR8570492 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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