CoexViewer

Coexpression detail for AT1G30700 and AT2G45220
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G30700 FAD-binding Berberine family protein 839950 At1g30700 0.35 6.84 6.15 5.67 17.10 1.71 2.83 2.67 3.07 4.02 7.44
ath AT2G45220 Plant invertase/pectin methylesterase inhibitor superfamily 819130 At2g45220 0.35
Platform:

coex z = 6.1459



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 839950
(z-scored expression)		 819130
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
16.2 -4.7 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.4 -4.4 -3.5 SRP051763 SRR1744383 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
14.0 -3.8 -3.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.9 4.0 3.5 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.2 -3.4 -3.9 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
12.2 -3.4 -3.5 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.0 -3.5 -3.4 SRP279501 SRR12558716 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
11.8 3.7 3.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.7 4.2 2.8 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
11.7 -4.2 -2.8 SRP253504 SRR11359530 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.3 -3.8 -2.9 SRP098906 SRR5231015 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
11.2 -3.0 -3.7 SRP277946 SRR12469806 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.0 3.7 SRP114806 SRR5894630 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 -3.9 -2.8 SRP253504 SRR11359560 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.9 -3.5 -3.2 SRP279501 SRR12558697 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
10.9 -3.6 -3.0 SRP044776 SRR1523931 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
10.8 -3.2 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.8 3.3 3.3 SRP219673 SRR10037584 Characterization of Arabidopsis thaliana promoter bidirectionality and antisense RNAs by depletion of nuclear RNA decay pathways [RNA-seq]
10.6 -2.9 -3.7 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.2 -3.2 SRP125057 SRR6294483 Genome-wide mapping of demethylase, REF6 binding targets and H3K27me3 marked regions as well as expression analysis in various Arabidopsis genetic backgrounds [RNA-seq]
10.3 3.2 3.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -2.4 -4.3 SRP158306 SRR7694974 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.2 -2.4 -4.3 SRP158306 SRR7694980 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.2 -2.4 -4.3 SRP158306 SRR7694981 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.9 [sec].