CoexViewer

Coexpression detail for AT1G62730 and AT2G30000
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G62730 Terpenoid synthases superfamily protein 842571 At1g62730 0.34 7.60 8.57 4.57 18.00 0.27 3.38 2.75 1.82 -1.59 2.65
ath AT2G30000 PHF5-like protein 817551 At2g30000 0.34
Platform:

coex z = 8.5736



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 842571
(z-scored expression)		 817551
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
43.3 -6.2 -7.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.0 -5.0 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.5 -4.7 -4.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
16.4 -3.9 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.7 -3.6 -4.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -4.1 -3.6 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
14.1 -2.4 -5.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.0 4.2 3.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.9 -4.5 -3.1 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
13.8 -2.3 -6.1 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.7 -4.2 -3.3 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
13.2 -3.9 -3.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.1 3.5 3.8 SRP063017 SRR2221840 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
13.0 -4.1 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.9 -3.6 -3.6 SRP139506 SRR6982846 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
12.8 -2.5 -5.2 ERP118109 ERR3624432 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.2 -4.3 -2.8 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.2 -3.5 -3.5 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
11.5 -3.1 -3.7 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
11.1 3.5 3.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.1 -1.9 -5.9 ERP116123 ERR3414631 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.0 -2.1 -5.3 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.1 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.7 3.7 2.9 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.5 3.3 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.5 -3.2 -3.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.5 -4.8 -2.2 SRP090458 SRR4295874 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.2 3.1 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 -3.5 -2.9 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.2 3.1 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.0 -3.4 SRP097877 SRR5205613 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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