CoexViewer

Coexpression detail for AT1G65370 and AT5G56380
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT1G65370 TRAF-like family protein 842848 At1g65370 0.39 6.99 5.21 6.87 108.60 1.51 2.62 0.60 1.17 1.56 1.07
ath AT5G56380 F-box/RNI-like/FBD-like domains-containing protein 835739 At5g56380 0.39
Platform:

coex z = 5.2147



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 842848
(z-scored expression)		 835739
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
22.9 3.2 7.1 SRP101274 SRR5308980 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
21.8 3.1 7.0 SRP101274 SRR5308969 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
20.2 -4.5 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.6 3.0 6.6 SRP101274 SRR5308983 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
18.2 -3.7 -5.0 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
16.2 3.2 5.0 SRP101274 SRR5308982 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
15.6 -3.3 -4.7 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.3 -3.6 -4.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.1 -4.2 -3.6 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
14.5 -3.9 -3.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.3 -3.5 -4.1 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.9 -3.7 -3.8 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.4 -3.8 -3.5 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
13.1 -3.1 -4.2 SRP051513 SRR1734309 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
12.9 -4.0 -3.2 SRP277946 SRR12469605 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 -3.6 -3.5 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.4 -4.7 -2.6 SRP090913 SRR4360375 WallOmics
12.4 -3.9 -3.2 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.5 -4.2 -2.7 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.5 3.1 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -2.1 -5.5 SRP282437 SRR12642287 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.4 -2.1 -5.5 SRP282437 SRR12642261 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.4 -2.1 -5.5 SRP282437 SRR12642270 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.3 -3.1 -3.7 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.3 -3.7 -3.1 ERP116123 ERR3414883 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.3 -3.4 -3.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
11.2 2.8 4.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 2.8 4.0 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.5 3.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.0 -3.0 -3.7 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.9 -3.9 -2.8 SRP083970 SRR4115297 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.6 2.7 3.9 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.2 -3.2 -3.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.1 -3.2 -3.1 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -2.7 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
Note: Samples whose contribution is more than 10 are outputted.



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