CoexViewer

Coexpression detail for FUT13 and AT4G00560
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath FUT13 fucosyltransferase 13 843530 At1g71990 0.36 5.97 5.58 4.73 82.90 0.80 2.07 1.16 0.73 4.04 1.92
ath AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 827978 At4g00560 0.36
Platform:

coex z = 5.5806



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 843530
(z-scored expression)		 827978
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.3 -5.0 -6.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
24.1 -4.3 -5.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.3 -3.9 -5.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.9 -4.5 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
18.4 -4.6 -4.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
17.9 -3.4 -5.3 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
17.6 -3.9 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.6 -3.8 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
15.3 -4.6 -3.3 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
15.1 -3.8 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.8 3.5 4.2 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
13.5 -3.2 -4.2 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.5 -4.1 -3.3 SRP090457 SRR4295748 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
13.3 3.7 3.6 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.2 -3.7 -3.6 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
13.0 3.4 3.8 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.9 3.6 3.6 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.9 -3.9 -3.3 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
12.8 3.3 3.8 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.8 3.5 3.7 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.7 -3.4 -3.8 SRP083970 SRR4115297 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
12.3 -4.6 -2.7 ERP013651 ERR1194830 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
12.3 -4.1 -3.0 SRP346154 SRR16948976 Plants grow in lunar regolith
12.1 -3.3 -3.6 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
11.8 -5.7 -2.1 SRP091641 SRR4449334 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.6 3.3 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.5 -3.4 -3.4 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
11.2 -3.0 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.1 3.3 3.3 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -3.2 -3.5 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.0 -3.4 -3.2 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.8 -2.5 -4.3 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
10.8 -3.4 -3.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 3.3 3.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -3.3 -3.2 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
10.5 -2.5 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.5 2.9 3.6 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.2 -3.3 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.3 3.1 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.3 -2.7 -3.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.3 -3.9 -2.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.2 -2.9 -3.5 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.0 3.2 3.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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