CoexViewer
Coexpression detail for AT1G75810 and AT5G43260
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ath | AT1G75810 | uncharacterized protein | 843914 | At1g75810 | 0.5 | 5.90 | 4.78 | 5.41 | 819.10 | 2.06 | 2.30 | 1.52 | -0.44 | 2.10 | 3.41 | |
ath | AT5G43260 | chaperone protein dnaJ-like protein | 834344 | At5g43260 | 0.5 |
coex z = 4.7824 |
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Sample contribution score* | 843914 (z-scored expression) |
834344 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
---|---|---|---|---|---|
29.6 | -5.8 | -5.1 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
20.5 | -4.3 | -4.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
19.0 | 3.7 | 5.2 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
18.9 | 4.1 | 4.6 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
18.5 | -4.5 | -4.1 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
15.5 | -3.8 | -4.1 | SRP100064 | SRR5263048 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
14.2 | -3.9 | -3.6 | SRP063017 | SRR2221844 | RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes |
14.1 | -3.1 | -4.6 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
13.8 | -3.8 | -3.6 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
13.6 | -3.5 | -3.9 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
13.5 | -6.1 | -2.2 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
13.2 | -4.1 | -3.2 | SRP279454 | SRR12554216 | RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis |
13.1 | 3.7 | 3.5 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
12.8 | -3.2 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
12.0 | 3.7 | 3.2 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
11.7 | -3.9 | -3.0 | SRP155742 | SRR8699957 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
11.6 | 3.3 | 3.5 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
11.6 | 3.0 | 3.9 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
11.6 | 3.6 | 3.2 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
11.2 | -3.5 | -3.2 | SRP249854 | SRR11103165 | A dynamic pattern of local auxin sources is required for root regeneration |
11.1 | -3.5 | -3.2 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
11.0 | -4.0 | -2.8 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
10.9 | 4.1 | 2.6 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
10.8 | -3.5 | -3.1 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
10.7 | -2.2 | -4.9 | SRP277943 | SRR12469360 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST] |
10.6 | 3.2 | 3.3 | SRP234996 | SRR10603595 | Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity |
10.5 | -3.5 | -3.0 | SRP114806 | SRR5894775 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
10.5 | 2.9 | 3.6 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
10.5 | -2.6 | -4.0 | SRP086629 | SRR4175056 | A global view of RNA-protein interactions reveals novel root hair cell fate regulators |
10.5 | -2.9 | -3.6 | SRP360225 | SRR18054365 | RNAseq analysis of Arabidopsis thaliana apices of Col-0, ap2-12 and rAP2-VENUS plants at 1-cm bolting stage |
10.3 | -3.2 | -3.2 | SRP073485 | SRR3401801 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
10.2 | 2.9 | 3.5 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
10.1 | -2.5 | -4.1 | SRP103817 | SRR5444419 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
10.0 | -2.8 | -3.6 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
10.0 | -3.4 | -2.9 | SRP139506 | SRR6982866 | Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots |
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