CoexViewer

Coexpression detail for PUB43 and AT5G05140
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath PUB43 ARM repeat superfamily protein 843971 At1g76390 0.28 2.39 2.11 2.03 92.60 0.81 1.61 3.76 3.85 0.16 3.27
ath AT5G05140 Transcription elongation factor (TFIIS) family protein 830396 At5g05140 0.28
Platform:

coex z = 2.1053



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 843971
(z-scored expression)		 830396
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.7 6.3 4.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
27.4 -4.6 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.3 -5.0 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.1 -5.0 -3.8 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
17.1 -3.9 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.6 4.4 3.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.2 2.6 6.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
15.8 -4.9 -3.2 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
14.5 -5.5 -2.7 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
14.3 -3.4 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.0 -3.4 -4.1 SRP266133 SRR11934703 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.9 -5.2 -2.7 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
13.5 3.6 3.8 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.5 -3.7 -3.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
13.4 -3.9 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.1 -5.0 -2.6 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.5 3.3 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.2 -3.6 -3.4 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.2 -3.0 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.1 3.5 3.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 3.2 3.7 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.6 -3.4 -3.4 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.5 -3.5 -3.3 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.4 -4.0 -2.9 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.2 -2.9 -3.8 SRP266133 SRR11934512 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.1 -2.7 -4.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.1 -3.0 -3.6 ERP115370 ERR3333436 Arabidopsis tissue atlas
10.8 -5.3 -2.0 SRP070918 SRR3193407 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.6 3.4 3.2 SRP253507 SRR11359746 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
10.4 3.2 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 -3.0 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -3.2 -3.2 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.8 [sec].