CoexViewer

Coexpression detail for SKP2B and AT1G68820
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath SKP2B RNI-like superfamily protein 844036 At1g77000 0.48 5.41 5.45 3.91 23.20 2.61 3.99 2.03 5.58 1.43 1.92
ath AT1G68820 Transmembrane Fragile-X-F-associated protein 843214 At1g68820 0.48
Platform:

coex z = 5.4475



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 844036
(z-scored expression)		 843214
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.8 -5.3 -6.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
23.5 -4.6 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
16.1 -3.7 -4.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.9 -4.7 -3.2 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.9 -3.5 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.6 -3.6 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.0 -3.8 -3.4 SRP151348 SRR7429883 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
12.9 3.5 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.7 -3.2 -3.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
12.6 3.2 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.0 3.4 3.6 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 -2.5 -4.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.8 -3.8 -3.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.6 -3.6 -3.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.6 3.4 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.3 -4.7 -2.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.2 -3.5 -3.2 SRP277946 SRR12470084 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.2 -3.4 SRP039091 SRR1179987 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.8 -3.2 -3.4 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.8 -3.9 -2.8 SRP214585 SRR9681378 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.4 -2.5 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.2 -2.2 -4.6 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
10.1 3.5 2.9 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.1 -3.0 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.1 -3.6 -2.8 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 -3.2 -3.1 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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