CoexViewer
Coexpression detail for AT1G77280 and AT1G05170
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT1G77280 | kinase with adenine nucleotide alpha hydrolases-like domain-containing protein | 844064 | At1g77280 | 0.44 | 4.87 | 3.83 | 4.59 | 912.80 | 3.86 | 1.00 | 1.06 | 1.47 | -1.88 | 4.39 | |
| ath | AT1G05170 | Galactosyltransferase family protein | 839292 | At1g05170 | 0.44 |
|
coex z = 3.8346 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 844064 (z-scored expression) |
839292 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 27.4 | -4.7 | -5.8 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 24.4 | -5.8 | -4.2 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 24.2 | -4.9 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 20.0 | 4.3 | 4.7 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 16.9 | -7.5 | -2.3 | SRP103817 | SRR5444473 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 16.9 | -3.8 | -4.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.8 | 4.1 | 3.8 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.7 | -3.7 | -3.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 14.5 | -3.6 | -4.0 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 14.0 | -3.4 | -4.1 | SRP091641 | SRR4426959 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.0 | -3.9 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 14.0 | 3.8 | 3.7 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.1 | -4.2 | -3.1 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.8 | -4.0 | -3.2 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 12.2 | -3.7 | -3.3 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.8 | -3.3 | -3.6 | SRP165731 | SRR8054398 | The embryonic transcriptome of Arabidopsis thaliana |
| 11.8 | -3.3 | -3.6 | SRP165731 | SRR8054393 | The embryonic transcriptome of Arabidopsis thaliana |
| 11.6 | 3.5 | 3.4 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 11.5 | 3.3 | 3.5 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.5 | -4.1 | -2.8 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.1 | -4.1 | -2.7 | SRP103736 | SRR5440882 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 10.6 | 3.6 | 3.0 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 10.3 | -2.3 | -4.5 | SRP100064 | SRR5263029 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 10.3 | -3.1 | -3.3 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.2 | -3.1 | -3.3 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 10.1 | 2.8 | 3.6 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
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